PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027359835.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | WRKY | ||||||||
Protein Properties | Length: 154aa MW: 17820 Da PI: 8.7842 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.5 | 1e-31 | 66 | 124 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYG+K vk+++fprsYYrC+++gC+vkk+++r ++d+++v++tYeg H+h+ XP_027359835.1 66 LDDGYQWRKYGKKIVKSNKFPRSYYRCSHRGCNVKKQIQRHSQDEEIVVTTYEGMHTHP 124 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence |
MEKHQVEFPT SSSTSLAAYN SNMVHVEKEE VLRTQGKAIS AQKEGDKQEI KQHRYAFQTR 60 SPVDVLDDGY QWRKYGKKIV KSNKFPRSYY RCSHRGCNVK KQIQRHSQDE EIVVTTYEGM 120 HTHPVDKSTE SFDQILGNLF LNNLLCSNVP PTLE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13080.1 | 9e-47 | WRKY family protein |