PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027359788.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SBP

Protein Properties

Length: 479aa MW: 53783 Da PI: 7.2489

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027359788.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	134.9	2.5e-42	178	254	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqv gC++dls+ k+yh+rhkvC+vhsk+++v+v+g+eqrfCqqCsrfh l efD++krsCrrrLa+hnerrrk+q XP_027359788.1 178 VCQVYGCNMDLSSSKDYHKRHKVCDVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRRRLAGHNERRRKPQ 254 6**************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MESWSYVPEE KGYLFSDEMD FSLDAFMRSR KALVEWDNKS NFERDGFNSD RGVVKSMEFV 60 DLGFPDLLQK SFHGGQPVET SSYELDSNSS KRGNSSTHVI ALDSSLGEEE SESKRVSSRV 120 ESKTHDSSLI DLKLGRLVDC KGASSDKVAK EGFTLTSIHP NTLAKRARTS TLPAQAPVCQ 180 VYGCNMDLSS SKDYHKRHKV CDVHSKTAKV IVNGIEQRFC QQCSRFHLLA EFDDGKRSCR 240 RRLAGHNERR RKPQFDYISG KQHKILQSYQ GTKYLGSSIQ NRPQFAFQDI FQSGILLGKH 300 DQISQSGRIK LEDDSIYGPQ LAAPITLSQE LSSCALSLLS DQSQNPSHHA AGNPLASCRI 360 PHGICVSNRD DQVSQTPLRI NSVDKYVPSE SFPYTIPSKE VIKNRSTTFS NAADHTLQVH 420 RDDDVCQASD LLDGRYRLSS EHGGTVDLFQ LSSHLQRVEQ QRNSVLVKWE NEECCFPTV

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MESWSYVPEE KGYLFSDEMD FSLDAFMRSR KALVEWDNKS NFERDGFNSD RGVVKSMEFV  60
DLGFPDLLQK SFHGGQPVET SSYELDSNSS KRGNSSTHVI ALDSSLGEEE SESKRVSSRV  120
ESKTHDSSLI DLKLGRLVDC KGASSDKVAK EGFTLTSIHP NTLAKRARTS TLPAQAPVCQ  180
VYGCNMDLSS SKDYHKRHKV CDVHSKTAKV IVNGIEQRFC QQCSRFHLLA EFDDGKRSCR  240
RRLAGHNERR RKPQFDYISG KQHKILQSYQ GTKYLGSSIQ NRPQFAFQDI FQSGILLGKH  300
DQISQSGRIK LEDDSIYGPQ LAAPITLSQE LSSCALSLLS DQSQNPSHHA AGNPLASCRI  360
PHGICVSNRD DQVSQTPLRI NSVDKYVPSE SFPYTIPSKE VIKNRSTTFS NAADHTLQVH  420
RDDDVCQASD LLDGRYRLSS EHGGTVDLFQ LSSHLQRVEQ QRNSVLVKWE NEECCFPTV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	3e-63	SBP family protein