PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027359575.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 551aa    MW: 61641.6 Da    PI: 6.2784
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027359575.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS421.95.4e-1291795492374
            GRAS   2 velLlecAeavssgdlelaqalLar.lselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                      e+L++cA+avs++d e a  l+++ l +++s  gdp+qRl ay++e+L+arl +s+s +ykal++++ +   s++ +++++++++++P+ kf++
  XP_027359575.1 179 NEVLIRCAQAVSDDDIETAVGLMNNvLAKMVSVGGDPIQRLGAYMLEGLRARLESSGSLIYKALRCEQPA---SKDLMSYMHILYQICPYWKFAY 270
                     689********************872566799999**********************************9...99999***************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN  I ea+++e+r+ iiDf+i qG+QW+ L+qaLasRp+gpp +RiTgv++++s   +   l+ +g+rL+++A++++vpfef+  va + ++
  XP_027359575.1 271 ISANVIIGEAMQNESRINIIDFQIAQGTQWLLLIQALASRPGGPPFIRITGVDDSQSYhaRGGGLHIVGKRLSDYAKSCKVPFEFHS-VAMSGSE 364
                     ******************************************************9887889999***********************.7999*** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +ele+L v+pgEalaVn+ + lh+++desvs+e++rd++L+lvkslsPkvv++veqe+++n+++F++rf+e+l+yy+a+f+s+++ lpr++++ri
  XP_027359575.1 365 VELENLMVQPGEALAVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFQRFVETLNYYTAMFESIDVALPRDDKQRI 459
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     + E+++++r+ivn++aceg er+erhe l+kWr+r+++aGF p pls+++++ ++ +l++++++ +r+e+++g+l+l Wk+r + + SaWr
  XP_027359575.1 460 SAEQHCVARDIVNMIACEGPERVERHELLGKWRSRFSMAGFLPCPLSSSVTAAVRNMLNEFNEN-FRLEQRDGALYLAWKKRFMCTSSAWR 549
                     **************************************************************55.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 551 aa     Download sequence    
MQTSQKHPTS AGIHLYHQPV QGIDPYTHYQ ILQSNSCHDI HESGSQGTNI SFEACKEQYF  60
TLESSPPNTG FIGCDSPSCA SVSSNRSTFS PQASQSYHSD QHHSSDNTYG SPTSVHSSAD  120
DSYELKHKLR ELEISLLGPE SDIVDSCHCR FEGGLKGASP SAKYNWDHIA EMIPKLDLNE  180
VLIRCAQAVS DDDIETAVGL MNNVLAKMVS VGGDPIQRLG AYMLEGLRAR LESSGSLIYK  240
ALRCEQPASK DLMSYMHILY QICPYWKFAY ISANVIIGEA MQNESRINII DFQIAQGTQW  300
LLLIQALASR PGGPPFIRIT GVDDSQSYHA RGGGLHIVGK RLSDYAKSCK VPFEFHSVAM  360
SGSEVELENL MVQPGEALAV NFPFVLHHMP DESVSTENHR DRLLRLVKSL SPKVVTLVEQ  420
ESNTNTSPFF QRFVETLNYY TAMFESIDVA LPRDDKQRIS AEQHCVARDI VNMIACEGPE  480
RVERHELLGK WRSRFSMAGF LPCPLSSSVT AAVRNMLNEF NENFRLEQRD GALYLAWKKR  540
FMCTSSAWRC Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17230.10.0GRAS family protein