PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027359453.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 265aa MW: 29587.2 Da PI: 8.0136

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027359453.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.1	1.5e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l+++ +++G+g +W + +++ g++R++k+c++rw++yl XP_027359453.1 14 RGPWSPEEDATLKNYLQKHGTGgNWISLPQKAGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	42.1	2e-13	71	111	4	46
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +T+eEd+++ + G++ W++Ia+ ++ gRt++++k++w++ XP_027359453.1 71 FTEEEDKIICTLYGSIGSR-WSLIAAQLP-GRTDNDVKNHWNT 111 9****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MGRAPCCDKS NVKRGPWSPE EDATLKNYLQ KHGTGGNWIS LPQKAGLKRC GKSCRLRWLN 60 YLRPHIKLGG FTEEEDKIIC TLYGSIGSRW SLIAAQLPGR TDNDVKNHWN TKLKKKFLAG 120 NTSIATGNNG SISNTISCTH HFSTFTLQPQ VEAFVFDQKQ NSACFDSHNV FDSEQTSIPV 180 PLPMPMESEA FYNQGSSCSA PPTRKVSMLS NATSSVEQKK HTQWFGYDHE GEDDVILLEY 240 YMLNDLLNHG FASQDKNSQV APSYG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	8e-73	MYB family protein