PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027359243.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 284aa MW: 30841.9 Da PI: 7.9098

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027359243.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	103.7	1.6e-32	4	108	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +C++C+vlr++C++dC ++p++ p++q++++ +++k++G++ +++l++a+p+++r+++++sl+yeA+ r+ +P+yG+vg+++++++ql+q+ XP_027359243.1 4 SCNGCRVLRKGCSEDCSIRPCLqwiknPESQANATVFLAKFYGRAGLMNLINAAPQHHRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQA 98 6******************************************************************************************** PP DUF260 91 kaelallkee 100 ++e++l +e+ XP_027359243.1 99 AVEAVLKGEP 108 *9988765 PP

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence
MRMSCNGCRV LRKGCSEDCS IRPCLQWIKN PESQANATVF LAKFYGRAGL MNLINAAPQH 60 HRPAIFRSLL YEACGRIVNP IYGSVGLLWS GSWQLCQAAV EAVLKGEPIT PITSEAAANG 120 RGPPLKAYDI RHVSKDENST GLNEATQRAK SRPRLKRTGT TVVKPKTLKG ARTGLDELET 180 ANRTTSHGSS LSHVAEGESK ESESVVSVET SILFHDEPES TVKARDQADE SGSEIGLELT 240 LGFEPVSRDD HVVPLKKRRI ELMSCCGSAE NGSCKTELGL EYSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02550.1	1e-104	LBD family protein