PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027358920.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

CO-like

Protein Properties

Length: 269aa MW: 29825.1 Da PI: 5.6085

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027358920.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	28.3	3.7e-09	16	60	4	42
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 +C+ +e+ ++ + C+ ++ lC +C e+H+ H++vp+ XP_027358920.1 16 ITCEACESAPAAFLCKADSASLCCSCDAEIHSAnplahrHNRVPI 60 58****************************966899977888886 PP
2	CCT	65.7	1.3e-22	200	243	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R+a++lRY eK+ktRkFeKkirY+sRKa+Ae RpRvKGrF+k++ XP_027358920.1 200 RQARVLRYIEKKKTRKFEKKIRYASRKAYAEIRPRVKGRFAKRN 243 99****************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MSRELGANNA PSRAVITCEA CESAPAAFLC KADSASLCCS CDAEIHSANP LAHRHNRVPI 60 VPSVGVEAVV YGDGVAEAAS WLLYDNRSGD DEFFFDENFD DNQCHEYEFG LSSASHQSFQ 120 VNQMKNQEAQ HFPLDVEFES PKPVLSYNGS LGLSASVSST DYSIVPESTI SELSNSQGTL 180 DHSSEPPNPV NLMPSSLTYR QARVLRYIEK KKTRKFEKKI RYASRKAYAE IRPRVKGRFA 240 KRNNTEAEMD HIFSSTLFTE AGYSIVPSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02380.1	1e-51	CO-like family protein