PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027358837.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 236aa MW: 27433.2 Da PI: 8.322 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.9 | 4.8e-18 | 9 | 56 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+ Edell +v+++G g W++++++ g++R++k+c++rw++yl XP_027358837.1 9 KGAWSDVEDELLRSCVQKHGEGKWNLVPKRAGLNRCRKSCRLRWLNYL 56 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.5 | 8.4e-15 | 62 | 106 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg +T++E + +++++lG++ W++Ia +++ gRt++++k++w++y XP_027358837.1 62 RGEFTEDEVDMMTRLHRLLGNR-WSLIAGRLP-GRTPNDVKNYWNTY 106 899*******************.*********.************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MESSLRVRKG AWSDVEDELL RSCVQKHGEG KWNLVPKRAG LNRCRKSCRL RWLNYLKPTI 60 KRGEFTEDEV DMMTRLHRLL GNRWSLIAGR LPGRTPNDVK NYWNTYIRKK VSADQKMKGE 120 ETVKPHIVIK PWPRTFSRTC SPWLRGRVLQ SGVSAKPCEA ASECSKWRTM MDDEGISNIE 180 NDKCCLDDQD RNIGKLFTDI NCGDEELTSF TPQGDDFPIE DQSWSDFLLQ INFWDS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 3e-55 | MYB family protein |