PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027358793.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

WRKY

Protein Properties

Length: 388aa MW: 43733.7 Da PI: 8.7702

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027358793.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.6	1.1e-32	140	196	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vkgsefprsYY+Ct+ +C vkkkver++ d++++ei+Y+g+Hnh XP_027358793.1 140 NDGYNWRKYGQKQVKGSEFPRSYYKCTHVNCYVKKKVERAS-DGHIIEIIYKGQHNHA 196 8**************************************.*************7 PP
2	WRKY	107.7	5.7e-34	318	376	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver++ dpk+v++tYeg+Hnh+ XP_027358793.1 318 LDDGYRWRKYGQKMVKGNPHPRSYYKCTSAGCNVRKHVERASMDPKAVITTYEGKHNHD 376 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MTNFLSDECS SFSQLLADGD GDGFHKLNQR RLIDLVVASS PHPSSFLSSP QSPFGISHQQ 60 ALLAHVTVQA VIAQLNMQMP ANYHKPTIVT TSNDEPLTQH SSFTLNDANS KQKVAPSENI 120 SHANKKYQML SSLATDKPSN DGYNWRKYGQ KQVKGSEFPR SYYKCTHVNC YVKKKVERAS 180 DGHIIEIIYK GQHNHAKPHA HRRVKVNSNE NTCIHHAKSE SKLNTHQAFW VGNSNKLGGE 240 ELGDCFVLES DQNQDFNQRA PSDNEDMGDV DIREEGDYSE PNPKRRNTDI GVSKAPVPHK 300 TITEPKIIVQ TRSEVDILDD GYRWRKYGQK MVKGNPHPRS YYKCTSAGCN VRKHVERASM 360 DPKAVITTYE GKHNHDVPAA RNVQQPQY

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MTNFLSDECS SFSQLLADGD GDGFHKLNQR RLIDLVVASS PHPSSFLSSP QSPFGISHQQ  60
ALLAHVTVQA VIAQLNMQMP ANYHKPTIVT TSNDEPLTQH SSFTLNDANS KQKVAPSENI  120
SHANKKYQML SSLATDKPSN DGYNWRKYGQ KQVKGSEFPR SYYKCTHVNC YVKKKVERAS  180
DGHIIEIIYK GQHNHAKPHA HRRVKVNSNE NTCIHHAKSE SKLNTHQAFW VGNSNKLGGE  240
ELGDCFVLES DQNQDFNQRA PSDNEDMGDV DIREEGDYSE PNPKRRNTDI GVSKAPVPHK  300
TITEPKIIVQ TRSEVDILDD GYRWRKYGQK MVKGNPHPRS YYKCTSAGCN VRKHVERASM  360
DPKAVITTYE GKHNHDVPAA RNVQQPQY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13960.1	1e-101	WRKY family protein