PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027358665.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

CO-like

Protein Properties

Length: 412aa MW: 46872.3 Da PI: 5.3809

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027358665.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.2	1.2e-06	12	55	3	40
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 +r C+ + + +++++C ++ +lC+ C H+ H++v XP_027358665.1 12 ARACDSCLKVRARWYCAADDAFLCHGCDNMVHSAnqlacrHERV 55 578****99*******************657888888876 PP
2	CCT	67	5.3e-23	362	405	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea+++RY+eKr+tR+F KkirYe+RK +Ae+RpR+KGrFvk++ XP_027358665.1 362 REARVSRYREKRRTRLFAKKIRYEVRKLNAEKRPRMKGRFVKRT 405 9*****************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MKEASALGAR TARACDSCLK VRARWYCAAD DAFLCHGCDN MVHSANQLAC RHERVRLQTV 60 SSKVNYSLTP HHKVAWHSGF TRKARTPRHN SKHLWVQQQQ QQPPLHEKEV LFSNTITLPL 120 VPDLGSEEPL LNDETEEQML CRVPVFDVEL YNEVKGERLN LDTTMNNDAV DGEEAFDLDN 180 FSSEFLPSDM DLAEFAVDVE SLLENGVDDD SSGHVKGSSE LDCKEEDEID AYVNRLGAKG 240 TMVKVKNEEE FDAETSCHLD SILNMNSESF DWNIIDSSES PQHEKEEKVV SEVGKRKEMF 300 LRLNYEEVIT AWDSQGSAWT TGTPPKFDTH DCWPDFLGSS GADVQWCYGE VRGLRGHADG 360 GREARVSRYR EKRRTRLFAK KIRYEVRKLN AEKRPRMKGR FVKRTSFVGA TA

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MKEASALGAR TARACDSCLK VRARWYCAAD DAFLCHGCDN MVHSANQLAC RHERVRLQTV  60
SSKVNYSLTP HHKVAWHSGF TRKARTPRHN SKHLWVQQQQ QQPPLHEKEV LFSNTITLPL  120
VPDLGSEEPL LNDETEEQML CRVPVFDVEL YNEVKGERLN LDTTMNNDAV DGEEAFDLDN  180
FSSEFLPSDM DLAEFAVDVE SLLENGVDDD SSGHVKGSSE LDCKEEDEID AYVNRLGAKG  240
TMVKVKNEEE FDAETSCHLD SILNMNSESF DWNIIDSSES PQHEKEEKVV SEVGKRKEMF  300
LRLNYEEVIT AWDSQGSAWT TGTPPKFDTH DCWPDFLGSS GADVQWCYGE VRGLRGHADG  360
GREARVSRYR EKRRTRLFAK KIRYEVRKLN AEKRPRMKGR FVKRTSFVGA TA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	373	389	RRTRLFAKKIRYEVRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25440.1	8e-91	CO-like family protein