PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027358572.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HSF
Protein Properties Length: 337aa    MW: 37812.6 Da    PI: 6.4122
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027358572.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind108.83.9e-34211122102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     F+ k+y++++d+++++li+w   +nsf+vld+ +f++++Lp +Fkh+nf+SFvRQLn+YgF+kv+ ++         weF++++F +g+k+ll++
  XP_027358572.1  21 FVIKTYHMVNDPTTDKLITWGPANNSFIVLDPLDFSHSLLPAFFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEWFLRGQKQLLKN 106
                     9********************999*****************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i r+k+
  XP_027358572.1 107 IVRRKH 112
                     ***985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MELYHSSNQN NNNNNVVIAP FVIKTYHMVN DPTTDKLITW GPANNSFIVL DPLDFSHSLL  60
PAFFKHNNFS SFVRQLNTYG FRKVDPDRWE FANEWFLRGQ KQLLKNIVRR KHGGGRSGSQ  120
KVEELDEETM VMEISRLKEE QKALEEELRG MNKRLETTEK RPQQMMAFLC KVVEDPNVLS  180
RILKERERKH LGEKKRRLIT SATSSSSSSD MAGTNSVKTE FEEEELTVGN NIISSPETGF  240
EIDNFCSPSP PQEAPAGYWG QVHGGVMDRA RIGQQRFGYD CAAVPTPLTA VSPAATVMGG  300
SYLGCENSKG RGSIFSEMAA ESSSLPPYPF SLLEGGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.12e-79HSF family protein