PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027358524.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Trihelix

Protein Properties

Length: 355aa MW: 41472.2 Da PI: 4.2907

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027358524.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	49.4	1.2e-15	111	196	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +Wt++e+ +L+e+ ++ +l+r++l+ W +v++k+ +e ++er+ qC++ +++l++rykk+k ++ + s ++p+f++++ XP_027358524.1 111 EWTEHETFVLLEVWGDKFLQLGRNSLRSEEWHDVAEKVsEELKVERTVAQCRSMLDKLKRRYKKEKSRMDEI-GVGSCKWPFFKKMD 196 5***********************************8889************************98.566679*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MDDMEDDARY PPKSFSLSRQ NPSHRQKHPI RAPPYHRPVP TRYEEVEDDD EDEEPDEFDD 60 ENDDDEAQNG YDDDEDDGYS RNPKKRKVPS SNYEFAPRVK FSYGNRSSVE EWTEHETFVL 120 LEVWGDKFLQ LGRNSLRSEE WHDVAEKVSE ELKVERTVAQ CRSMLDKLKR RYKKEKSRMD 180 EIGVGSCKWP FFKKMDMLMA SSARQEYGLA CGVDSGEYVF MNTRVYLNRS NGFDEMRDSP 240 GESESSEEEE EDSDGAAVPR RFRGGVGGEE EVDEEEDEAS FRVLADSIQK FGKIYEKIEN 300 SKRQQMMELE KMRLDFNREL ELQKKQILER AQAEIAKIQE GDDDETDTSA ENLSE

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MDDMEDDARY PPKSFSLSRQ NPSHRQKHPI RAPPYHRPVP TRYEEVEDDD EDEEPDEFDD  60
ENDDDEAQNG YDDDEDDGYS RNPKKRKVPS SNYEFAPRVK FSYGNRSSVE EWTEHETFVL  120
LEVWGDKFLQ LGRNSLRSEE WHDVAEKVSE ELKVERTVAQ CRSMLDKLKR RYKKEKSRMD  180
EIGVGSCKWP FFKKMDMLMA SSARQEYGLA CGVDSGEYVF MNTRVYLNRS NGFDEMRDSP  240
GESESSEEEE EDSDGAAVPR RFRGGVGGEE EVDEEEDEAS FRVLADSIQK FGKIYEKIEN  300
SKRQQMMELE KMRLDFNREL ELQKKQILER AQAEIAKIQE GDDDETDTSA ENLSE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	166	171	DKLKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	2e-94	Trihelix family protein