PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027358348.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family TCP
Protein Properties Length: 406aa    MW: 45224.5 Da    PI: 9.235
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027358348.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1471.3e-451022712133
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..............ssssasec.eaesssss 81 
                     ++kkdrhski+T++g+RdRRvRls+++a++fFdLqd+LGfdk+s+t+eWL++++k+aikel+++              s+ss+sec ++ +  s 
  XP_027358348.1 102 PAKKDRHSKIYTSQGLRDRRVRLSIDIARKFFDLQDMLGFDKASNTLEWLFNKSKKAIKELARSkhsnnnnnseegakSFSSSSECdDDCEVISG 196
                     68**************************************************************9999999998888877777888633333333 PP

             TCP  82 asnsssg...........................kaaksaakskksqksaasalnlakesrakarararertrekmrik 133
                      ++++++                            aa++ +k k+sqk+     ++ kesr+karararert++k + +
  XP_027358348.1 197 IQQQQQQqlitcdaatpnnlqqgldsndnksttlMAARERMKLKRSQKE----PAKIKESREKARARARERTSNKIMCN 271
                     3333333677888888888999999998755444444444444444444....45888************999985443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    
MFPYSSTPYP SFPSSSSSSY PPFPFLNPEH ASASNTLLHD PLSVPYIPTH NPPNIQETLT  60
NFPLSDHNCG GGGGSTMTKQ DPSGGGSGVP HYGISCFLTK RPAKKDRHSK IYTSQGLRDR  120
RVRLSIDIAR KFFDLQDMLG FDKASNTLEW LFNKSKKAIK ELARSKHSNN NNNSEEGAKS  180
FSSSSECDDD CEVISGIQQQ QQQQLITCDA ATPNNLQQGL DSNDNKSTTL MAARERMKLK  240
RSQKEPAKIK ESREKARARA RERTSNKIMC NVNTNTNLKK KCPAIENHPQ IMHQSRSPSD  300
HPHHLVGSEA PRDDFNVIEE SIVIKRKLKP SLMSSSHHHH QNLVIPKEAA SFNNGDYHPF  360
PNLSPNWDAN GSTGRSNFCA IASMNLSTGL QIFGKSWEEC TNPRLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.23e-28TCP family protein