PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027358330.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HSF

Protein Properties

Length: 342aa MW: 37234.6 Da PI: 6.174

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027358330.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	116.6	1.5e-36	27	117	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d++++++isw+e+g++f+v++++ fak++LpkyFkh+nf+SFvRQLn+YgF+kv ++ weF+++ F++g+k+ll++ XP_027358330.1 27 FLTKTYQLVDDQSIDDVISWNEDGSTFIVWNPTVFAKDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFSNECFRRGEKRLLCE 112 9***************************************************************99.........************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_027358330.1 113 IQRRK 117 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MAPPPPVEHN TDSTTAADSQ RSIPTPFLTK TYQLVDDQSI DDVISWNEDG STFIVWNPTV 60 FAKDLLPKYF KHNNFSSFVR QLNTYGFRKV VPDRWEFSNE CFRRGEKRLL CEIQRRKISL 120 SPSPSPSPTA AAMASAMVAV PTPMPLTTIP SAMPIISPSN SGEEQVISSN SSPSRAPAEL 180 LDENERLRKE NLQLTKELAE MRSLCNNIYT LMSNYANANN QTDGGSGGAQ GSRESGMTAV 240 KPLELMPVKR SSGEGAAEMA PEEMNPKLFG VAIGAKRARE GGGSGSCGGG GGAGGEEDTL 300 LRLHHSGSVD VKSEPLDCQN HHDNHQTPWL NQCNRTNQRV CN

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MAPPPPVEHN TDSTTAADSQ RSIPTPFLTK TYQLVDDQSI DDVISWNEDG STFIVWNPTV  60
FAKDLLPKYF KHNNFSSFVR QLNTYGFRKV VPDRWEFSNE CFRRGEKRLL CEIQRRKISL  120
SPSPSPSPTA AAMASAMVAV PTPMPLTTIP SAMPIISPSN SGEEQVISSN SSPSRAPAEL  180
LDENERLRKE NLQLTKELAE MRSLCNNIYT LMSNYANANN QTDGGSGGAQ GSRESGMTAV  240
KPLELMPVKR SSGEGAAEMA PEEMNPKLFG VAIGAKRARE GGGSGSCGGG GGAGGEEDTL  300
LRLHHSGSVD VKSEPLDCQN HHDNHQTPWL NQCNRTNQRV CN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62020.1	3e-95	HSF family protein