PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027358196.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 647aa    MW: 70481.4 Da    PI: 7.1716
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027358196.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS330.23.9e-1012776472374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     +++L+e+A a+++g++  a+++L+rl +  +++g++ qRl+ +++ AL++r++     + +  p+ e     s e++ +++l+ e s ++k++++
  XP_027358196.1 277 KQTLMEAASAITEGKNDSATEILNRLAQGPNQTGNSDQRLTDCMVSALKSRMNP----VENPPPVAEL---FSREHAESTQLLLENSVCFKVGFM 364
                     689**************************************************9....4443344444...4999999***************** PP

            GRAS  97 taNqaIleavege...ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
                     +aN aIlea+ +e   +r  ++Dfdi+qG Q++ Ll+aL++R+  ++  +++i +v++  +g +e+++++ge L++ Ae+l++ fe +v+v+++l
  XP_027358196.1 365 AANFAILEAAFEEkteNRFCVVDFDIGQGKQYLHLLNALSARSqnGKVSTVKIVAVAE--NGAEERVRAVGEMLSRQAERLRIGFELRVVVTQKL 457
                     ********97555466999***********************97555669********..77********************************* PP

            GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpresee 281
                     ++l+ e+L ++ +Ea+ Vn++++l +++desvs+e++rde+L+ vk+l P+vv++veqe++ n+++Fl+r++e+l+yys+lfds+ea+++r++ +
  XP_027358196.1 458 AELTRESLGCDADEAIMVNFAYKLNKIPDESVSTENPRDELLRRVKRLVPRVVTIVEQEMNANTAPFLARVAESLSYYSSLFDSIEATVGRDNPN 552
                     *********************************************************************************************** PP

            GRAS 282 rikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdg...yrveeesgslvlgWkdrpLvsvSaW 373
                     r+kvE+  l+r+ +n vaceg++r+er+e ++kWr+r+++aGF+  pls++ a+++k+ll+  +++     +v+ee+g +++gW++r+L+++SaW
  XP_027358196.1 553 RVKVEEG-LSRKMCNSVACEGRDRVERCEVFGKWRARMSMAGFQLKPLSQNLAESIKSLLASGNNRVnpaLTVKEENGGICFGWMGRTLTVASAW 646
                     *******.****************************************************987744334599*********************** PP

            GRAS 374 r 374
                     r
  XP_027358196.1 647 R 647
                     8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 647 aa     Download sequence    
MSSPGFTGGG GASEFFGGAG GFAGRSIPAA TAMNNPNATA SVANNLHPLY RTQQQLPAMF  60
LDPSSQITQR PTPSVIGKRT LTEFQTSSNT TNNNLNLNHN QVLSNLLLRS VKPRTTFTHT  120
SPMSAMDYSI PEIHTQRFGA PLLHQLRPQP INLPNNGSIP INGPNFSYRN SNLGLPQNRV  180
QIPVPAPVQS SEPEKKTMDH RLQELAKQLL EDNDDEGEAD AASVITTSEW SETYQNLISP  240
GPTAPVQKPV SSSPTSSTTS STSSSSSVAS PASGCFKQTL MEAASAITEG KNDSATEILN  300
RLAQGPNQTG NSDQRLTDCM VSALKSRMNP VENPPPVAEL FSREHAESTQ LLLENSVCFK  360
VGFMAANFAI LEAAFEEKTE NRFCVVDFDI GQGKQYLHLL NALSARSQNG KVSTVKIVAV  420
AENGAEERVR AVGEMLSRQA ERLRIGFELR VVVTQKLAEL TRESLGCDAD EAIMVNFAYK  480
LNKIPDESVS TENPRDELLR RVKRLVPRVV TIVEQEMNAN TAPFLARVAE SLSYYSSLFD  540
SIEATVGRDN PNRVKVEEGL SRKMCNSVAC EGRDRVERCE VFGKWRARMS MAGFQLKPLS  600
QNLAESIKSL LASGNNRVNP ALTVKEENGG ICFGWMGRTL TVASAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-146GRAS family protein