PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027357663.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 994aa MW: 111941 Da PI: 6.7024

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027357663.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.8	1e-07	438	482	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g WT eEd l+ +v+ +G ++W Ia + ++Rt+ qc r+q XP_027357663.1 438 GTWTGEEDRSLLLLVQDMGIRNWFDIAVSLATNRTPFQCLARYQR 482 78*****************************************96 PP
2	Myb_DNA-binding	40.7	5.4e-13	492	534	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT+eEd +l av+ +G ++W ++a+ + +Rt+ qc +rw k XP_027357663.1 492 EWTEEEDAQLCSAVTFFGENDWQSVASVLE-RRTGTQCSNRWKK 534 7***************************.*********98 PP
3	Myb_DNA-binding	36.4	1.2e-11	541	584	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE +l av ++G + W+ Ia+ ++ gR qc++r+++ XP_027357663.1 541 KGSFTQEENIRLTVAVMLFGRK-WNQIAKFVP-GRIQSQCRDRYLN 584 799***************99.*****.*********98 PP
4	Myb_DNA-binding	44.5	3.6e-14	594	634	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT+eEd++l a++++G W+++a++++ Rt+ qc+ rw XP_027357663.1 594 GWTEEEDLKLEVAIAKHGYC-WSKVAEEVP-PRTDSQCRKRWK 634 5***************99.*****.9********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 994 aa Download sequence
MTPRADEHEK DNLSATDDDD DDDFKEDMAA IARACMIAGH HANSDSAAGP NLDVRAGQIP 60 AEDPLLDSGD AIVPVTTDSD DEQDDLECLK RVQSLYQPLS SIPPLPPPLT AKSDDDDVDD 120 FETVRAIMKR FSKYGEGPHE GKTKTLPEED QTSIPECDGD IAKDSIHYES HGGDLCPVSQ 180 DPDEITDWLT ENMEVQHFDF DESCQPDAFK SSKLPKNRTS FPPSAHAVVD AIQKNRSLQR 240 FLRSKLIELE AKIEENKQLR NKVKLLKDFQ LSCIRRTGHA LSLKKDPRVQ LISAKKSSAP 300 KNSKSHKKVS AMCCGPEENS RVANYKMVLE RFPLSLDRKK WSNVERENLL KGIKQQFQEI 360 LLQISVDRIS SECSFGDAND LDGIISSVKD LEITPERIRE FLPKVNWDRL ASMYVVGRTG 420 AECESRWLNC EDPLINQGTW TGEEDRSLLL LVQDMGIRNW FDIAVSLATN RTPFQCLARY 480 QRSLNPSMLN SEWTEEEDAQ LCSAVTFFGE NDWQSVASVL ERRTGTQCSN RWKKSLCPER 540 KGSFTQEENI RLTVAVMLFG RKWNQIAKFV PGRIQSQCRD RYLNSLDPSL KWGGWTEEED 600 LKLEVAIAKH GYCWSKVAEE VPPRTDSQCR KRWKVICPEQ VPLLQEARKK KKSIVANNFV 660 DRESERPALT LDDFLPLHML APKSSVGAAP NHWKKRKRKS SNVSKKMRSR KRVKKARHTE 720 EVQDVGVHSD DQVKNCSEEV PGFASKVPEK MRSKKHAKRT QIHPNEVEDT VQGVKVKTCV 780 ESSESQSTSN ESSENQDWDN VTLACFIQNK SKKKLSKCTK TLSQASLSPR TTVVFKEADN 840 QIPSGEQVGL SQSFDTTDGT KDLFVQQNVG SDRRVGKPED ANTLTGDEDD PPLVSLMGNK 900 PKKRSQAAKG RGAFSSSKLK KGSALPCDEH CANKPIIIIS DDGGPSMSKH VEEETVLHGG 960 VAEHTNNMEE KDEILSSFLQ NRTQRQRKRP SRYS

Sequence ? help Back to Top

Protein Sequence Length: 994 aa Download sequence

MTPRADEHEK DNLSATDDDD DDDFKEDMAA IARACMIAGH HANSDSAAGP NLDVRAGQIP  60
AEDPLLDSGD AIVPVTTDSD DEQDDLECLK RVQSLYQPLS SIPPLPPPLT AKSDDDDVDD  120
FETVRAIMKR FSKYGEGPHE GKTKTLPEED QTSIPECDGD IAKDSIHYES HGGDLCPVSQ  180
DPDEITDWLT ENMEVQHFDF DESCQPDAFK SSKLPKNRTS FPPSAHAVVD AIQKNRSLQR  240
FLRSKLIELE AKIEENKQLR NKVKLLKDFQ LSCIRRTGHA LSLKKDPRVQ LISAKKSSAP  300
KNSKSHKKVS AMCCGPEENS RVANYKMVLE RFPLSLDRKK WSNVERENLL KGIKQQFQEI  360
LLQISVDRIS SECSFGDAND LDGIISSVKD LEITPERIRE FLPKVNWDRL ASMYVVGRTG  420
AECESRWLNC EDPLINQGTW TGEEDRSLLL LVQDMGIRNW FDIAVSLATN RTPFQCLARY  480
QRSLNPSMLN SEWTEEEDAQ LCSAVTFFGE NDWQSVASVL ERRTGTQCSN RWKKSLCPER  540
KGSFTQEENI RLTVAVMLFG RKWNQIAKFV PGRIQSQCRD RYLNSLDPSL KWGGWTEEED  600
LKLEVAIAKH GYCWSKVAEE VPPRTDSQCR KRWKVICPEQ VPLLQEARKK KKSIVANNFV  660
DRESERPALT LDDFLPLHML APKSSVGAAP NHWKKRKRKS SNVSKKMRSR KRVKKARHTE  720
EVQDVGVHSD DQVKNCSEEV PGFASKVPEK MRSKKHAKRT QIHPNEVEDT VQGVKVKTCV  780
ESSESQSTSN ESSENQDWDN VTLACFIQNK SKKKLSKCTK TLSQASLSPR TTVVFKEADN  840
QIPSGEQVGL SQSFDTTDGT KDLFVQQNVG SDRRVGKPED ANTLTGDEDD PPLVSLMGNK  900
PKKRSQAAKG RGAFSSSKLK KGSALPCDEH CANKPIIIIS DDGGPSMSKH VEEETVLHGG  960
VAEHTNNMEE KDEILSSFLQ NRTQRQRKRP SRYS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	630	652	RKRWKVICPEQVPLLQEARKKKK
2	694	699	KKRKRK
3	694	715	KKRKRKSSNVSKKMRSRKRVKK
4	695	716	KKRKRKSSNVSKKMRSRKRVKK
5	695	715	KRKRKSSNVSKKMRSRKRVKK
6	697	717	KRKRKSSNVSKKMRSRKRVKK
7	705	714	KKMRSRKRVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18100.1	1e-172	MYB family protein