PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027357662.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 1013aa MW: 114338 Da PI: 7.1321

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027357662.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.8	1.1e-07	457	501	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g WT eEd l+ +v+ +G ++W Ia + ++Rt+ qc r+q XP_027357662.1 457 GTWTGEEDRSLLLLVQDMGIRNWFDIAVSLATNRTPFQCLARYQR 501 78*****************************************96 PP
2	Myb_DNA-binding	40.7	5.5e-13	511	553	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT+eEd +l av+ +G ++W ++a+ + +Rt+ qc +rw k XP_027357662.1 511 EWTEEEDAQLCSAVTFFGENDWQSVASVLE-RRTGTQCSNRWKK 553 7***************************.*********98 PP
3	Myb_DNA-binding	36.4	1.2e-11	560	603	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE +l av ++G + W+ Ia+ ++ gR qc++r+++ XP_027357662.1 560 KGSFTQEENIRLTVAVMLFGRK-WNQIAKFVP-GRIQSQCRDRYLN 603 799***************99.*****.*********98 PP
4	Myb_DNA-binding	44.4	3.7e-14	613	653	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT+eEd++l a++++G W+++a++++ Rt+ qc+ rw XP_027357662.1 613 GWTEEEDLKLEVAIAKHGYC-WSKVAEEVP-PRTDSQCRKRWK 653 5***************99.*****.9********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 1013 aa Download sequence
MTPRADEHEK DNLSATDDDD DDDFKEDMAA IARACMIAGH HANSDSAAGP NLDVRAGQIP 60 AEDPLLDSGD AIVPVTTDSD DEQDDLECLK RVQSLYQPLS SIPPLPPPLT AKSDDDDVDD 120 FETVRAIMKR FSKYGEGPHE GKTKTLPEED QTSIPECDGD IAKDSIHYES HGGDLCPVSQ 180 DPDEITDWLT ENMEVQHFDF DESCQPDAFK SSKLPKNRTS FPPSAHAVVD AIQKNRSLQR 240 FLRSKLIELE AKIEENKQLR NKVKLLKDFQ LSCIRRTGHA LSLKKDPRVQ LISAKKSSAP 300 KNSKSHKKVS AMCCGPEENS RVANYKMVLE RFPLSLDRKK WSNVERENLL KGIKQQFQEI 360 LLQISVDRIS SECSFGDAND LDGIISSVKD LEITPERIRE FLPKVNWDRL ASMYVVGRTG 420 AECESRLGIK MLYRSIRFFW GWGKRWLNCE DPLINQGTWT GEEDRSLLLL VQDMGIRNWF 480 DIAVSLATNR TPFQCLARYQ RSLNPSMLNS EWTEEEDAQL CSAVTFFGEN DWQSVASVLE 540 RRTGTQCSNR WKKSLCPERK GSFTQEENIR LTVAVMLFGR KWNQIAKFVP GRIQSQCRDR 600 YLNSLDPSLK WGGWTEEEDL KLEVAIAKHG YCWSKVAEEV PPRTDSQCRK RWKVICPEQV 660 PLLQEARKKK KSIVANNFVD RESERPALTL DDFLPLHMLA PKSSVGAAPN HWKKRKRKSS 720 NVSKKMRSRK RVKKARHTEE VQDVGVHSDD QVKNCSEEVP GFASKVPEKM RSKKHAKRTQ 780 IHPNEVEDTV QGVKVKTCVE SSESQSTSNE SSENQDWDNV TLACFIQNKS KKKLSKCTKT 840 LSQASLSPRT TVVFKEADNQ IPSGEQVGLS QSFDTTDGTK DLFVQQNVGS DRRVGKPEDA 900 NTLTGDEDDP PLVSLMGNKP KKRSQAAKGR GAFSSSKLKK GSALPCDEHC ANKPIIIISD 960 DGGPSMSKHV EEETVLHGGV AEHTNNMEEK DEILSSFLQN RTQRQRKRPS RYS

Sequence ? help Back to Top

Protein Sequence Length: 1013 aa Download sequence

MTPRADEHEK DNLSATDDDD DDDFKEDMAA IARACMIAGH HANSDSAAGP NLDVRAGQIP  60
AEDPLLDSGD AIVPVTTDSD DEQDDLECLK RVQSLYQPLS SIPPLPPPLT AKSDDDDVDD  120
FETVRAIMKR FSKYGEGPHE GKTKTLPEED QTSIPECDGD IAKDSIHYES HGGDLCPVSQ  180
DPDEITDWLT ENMEVQHFDF DESCQPDAFK SSKLPKNRTS FPPSAHAVVD AIQKNRSLQR  240
FLRSKLIELE AKIEENKQLR NKVKLLKDFQ LSCIRRTGHA LSLKKDPRVQ LISAKKSSAP  300
KNSKSHKKVS AMCCGPEENS RVANYKMVLE RFPLSLDRKK WSNVERENLL KGIKQQFQEI  360
LLQISVDRIS SECSFGDAND LDGIISSVKD LEITPERIRE FLPKVNWDRL ASMYVVGRTG  420
AECESRLGIK MLYRSIRFFW GWGKRWLNCE DPLINQGTWT GEEDRSLLLL VQDMGIRNWF  480
DIAVSLATNR TPFQCLARYQ RSLNPSMLNS EWTEEEDAQL CSAVTFFGEN DWQSVASVLE  540
RRTGTQCSNR WKKSLCPERK GSFTQEENIR LTVAVMLFGR KWNQIAKFVP GRIQSQCRDR  600
YLNSLDPSLK WGGWTEEEDL KLEVAIAKHG YCWSKVAEEV PPRTDSQCRK RWKVICPEQV  660
PLLQEARKKK KSIVANNFVD RESERPALTL DDFLPLHMLA PKSSVGAAPN HWKKRKRKSS  720
NVSKKMRSRK RVKKARHTEE VQDVGVHSDD QVKNCSEEVP GFASKVPEKM RSKKHAKRTQ  780
IHPNEVEDTV QGVKVKTCVE SSESQSTSNE SSENQDWDNV TLACFIQNKS KKKLSKCTKT  840
LSQASLSPRT TVVFKEADNQ IPSGEQVGLS QSFDTTDGTK DLFVQQNVGS DRRVGKPEDA  900
NTLTGDEDDP PLVSLMGNKP KKRSQAAKGR GAFSSSKLKK GSALPCDEHC ANKPIIIISD  960
DGGPSMSKHV EEETVLHGGV AEHTNNMEEK DEILSSFLQN RTQRQRKRPS RYS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	649	671	RKRWKVICPEQVPLLQEARKKKK
2	713	718	KKRKRK
3	713	734	KKRKRKSSNVSKKMRSRKRVKK
4	714	735	KKRKRKSSNVSKKMRSRKRVKK
5	714	734	KRKRKSSNVSKKMRSRKRVKK
6	716	736	KRKRKSSNVSKKMRSRKRVKK
7	724	733	KKMRSRKRVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18100.1	1e-167	MYB family protein