PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027357479.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | ARF | ||||||||
Protein Properties | Length: 836aa MW: 92876.3 Da PI: 6.5715 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 73.1 | 3.5e-23 | 148 | 249 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++ +++a+e+ ++ + +++l+ +d+++++W++++i+r++++r++l++GW+ Fv++++L +gD ++F + + XP_027357479.1 148 FCKTLTASDTSTHGGFSVLRRHADEClppldmtKQ--PPTQELVAKDLHSNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGE 238 99****************************97433..34459************************************************..449 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++el+v+v+r+ XP_027357479.1 239 NGELRVGVRRA 249 999*****996 PP | |||||||
2 | Auxin_resp | 120.6 | 1.2e-39 | 274 | 356 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t+++F+v+Y+Pr+s++eF+v++++++++lk+++++GmRfkm+fe+e+++e+r++Gt+vg++d+dp rW++SkWr+Lk XP_027357479.1 274 AWHAIRTGTIFTVYYKPRTSPAEFIVPYNQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPKRWRESKWRCLK 356 89*******************************************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 836 aa Download sequence |
MASSEVTMNG NCLNHNDASR NAATETQNAH SPTTAKDAEV ALFRELWHAC AGPLVTVPRE 60 DERVFYFPQG HIEQVEASTN QVADQHMPVY DLPPKILCRV INVQLKAEPD TDEVFAQVTL 120 LPESNQNEND IEKEPPPPPP PRFHVHSFCK TLTASDTSTH GGFSVLRRHA DECLPPLDMT 180 KQPPTQELVA KDLHSNEWRF RHIFRGQPRR HLLQSGWSVF VSSKRLVAGD AFIFLRGENG 240 ELRVGVRRAM RHQGNVPSSV ISSHSMHLGV LATAWHAIRT GTIFTVYYKP RTSPAEFIVP 300 YNQYMESLKN NYTIGMRFKM RFEGEEAPEQ RFTGTIVGIE DADPKRWRES KWRCLKVRWD 360 ETSNTPRPER VSPWKIEPAI APPALNPLSM PRPKRPRANA VPSSPDSSVL TREASSKVSI 420 DPSPTNGFPR VLQGQEFTTL RGNFAESNDS DTPEKSVVWP PAVDDEKIDV VSTSRRYGSG 480 SWMSMGRNEP TYSDLLSGFG ASGDPSHSAL IDQMTTVAFP ARKQSWTVMS SGLCLNILDP 540 NTKGSAHGGD TTYQARGNLK YSAFGEYPAL HGHKVEHSHG NLMPPPPTPL TQYQSPHSIE 600 LMSKPVSVKT YEAVKPKDGD CKLFGISLIS SPVVPEPSVS QRNVSDPAGQ MPLTSHQQRT 660 SENDQKSDHS KGSKLADGLV VDDHDKPLQT SQLHMKDVQA KPLGGSARSC TKVHKKGIAL 720 GRSVDLAKFS GYKELVDELD ELFDFEGKLK STEKDWLIVY TDNEGDMMLV GDDPWQEFCG 780 MVRKIFIYPK EEIQKMSPGT LGSKNEENQS ASEGADAQDI KCQPQQELNS DNGLDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62000.3 | 0.0 | ARF family protein |