PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027357469.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 836aa    MW: 92876.3 Da    PI: 6.5715
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027357469.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.13.5e-23148249199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++ +++a+e+       ++  + +++l+ +d+++++W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + +
  XP_027357469.1 148 FCKTLTASDTSTHGGFSVLRRHADEClppldmtKQ--PPTQELVAKDLHSNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGE 238
                     99****************************97433..34459************************************************..449 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     ++el+v+v+r+
  XP_027357469.1 239 NGELRVGVRRA 249
                     999*****996 PP
2Auxin_resp120.61.2e-39274356183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a+ha++t+++F+v+Y+Pr+s++eF+v++++++++lk+++++GmRfkm+fe+e+++e+r++Gt+vg++d+dp rW++SkWr+Lk
  XP_027357469.1 274 AWHAIRTGTIFTVYYKPRTSPAEFIVPYNQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPKRWRESKWRCLK 356
                     89*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 836 aa     Download sequence    
MASSEVTMNG NCLNHNDASR NAATETQNAH SPTTAKDAEV ALFRELWHAC AGPLVTVPRE  60
DERVFYFPQG HIEQVEASTN QVADQHMPVY DLPPKILCRV INVQLKAEPD TDEVFAQVTL  120
LPESNQNEND IEKEPPPPPP PRFHVHSFCK TLTASDTSTH GGFSVLRRHA DECLPPLDMT  180
KQPPTQELVA KDLHSNEWRF RHIFRGQPRR HLLQSGWSVF VSSKRLVAGD AFIFLRGENG  240
ELRVGVRRAM RHQGNVPSSV ISSHSMHLGV LATAWHAIRT GTIFTVYYKP RTSPAEFIVP  300
YNQYMESLKN NYTIGMRFKM RFEGEEAPEQ RFTGTIVGIE DADPKRWRES KWRCLKVRWD  360
ETSNTPRPER VSPWKIEPAI APPALNPLSM PRPKRPRANA VPSSPDSSVL TREASSKVSI  420
DPSPTNGFPR VLQGQEFTTL RGNFAESNDS DTPEKSVVWP PAVDDEKIDV VSTSRRYGSG  480
SWMSMGRNEP TYSDLLSGFG ASGDPSHSAL IDQMTTVAFP ARKQSWTVMS SGLCLNILDP  540
NTKGSAHGGD TTYQARGNLK YSAFGEYPAL HGHKVEHSHG NLMPPPPTPL TQYQSPHSIE  600
LMSKPVSVKT YEAVKPKDGD CKLFGISLIS SPVVPEPSVS QRNVSDPAGQ MPLTSHQQRT  660
SENDQKSDHS KGSKLADGLV VDDHDKPLQT SQLHMKDVQA KPLGGSARSC TKVHKKGIAL  720
GRSVDLAKFS GYKELVDELD ELFDFEGKLK STEKDWLIVY TDNEGDMMLV GDDPWQEFCG  780
MVRKIFIYPK EEIQKMSPGT LGSKNEENQS ASEGADAQDI KCQPQQELNS DNGLDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein