PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027357389.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 313aa    MW: 35446.2 Da    PI: 6.3075
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027357389.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.32.3e-152168148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W+++Ede+l+++    G g+W+ Iar  g+ R++k+c++rw +yl
   XP_027357389.1 21 KGLWSPDEDEKLIRYMLTNGQGCWSDIARNAGLQRCGKSCRLRWINYL 68
                     678*******************************************97 PP
2Myb_DNA-binding50.93.6e-1674118147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+++++E++l+++++  lG++ W+ Ia++++ gRt++++k++w++ 
   XP_027357389.1  74 RGAFSPQEEDLIIHLHSILGNR-WSQIAARLP-GRTDNEIKNFWNST 118
                      89********************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MRKPDLMGKD KMNNIKSKLR KGLWSPDEDE KLIRYMLTNG QGCWSDIARN AGLQRCGKSC  60
RLRWINYLRP DLKRGAFSPQ EEDLIIHLHS ILGNRWSQIA ARLPGRTDNE IKNFWNSTLK  120
KRLKTNPCTP SLNISTDSSE SKDHVMSGIM PINEHDLMTM CMDSSSSMSS MHAVDFVDQL  180
DPFPMLINNQ YDMTSISADF PNMPTCLTQI GMVDGHQGNY GILEPNKMGL GRDFTLPSLE  240
SRCTESNCAP IDVKSHNNLF NYDSLNSTSK TQGSKLEDLF GFGNHEQGES LKMGEWDLGN  300
LMQDITSFPF LDF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1119125LKKRLKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08500.16e-78MYB family protein