PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027357388.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | LBD | ||||||||
Protein Properties | Length: 228aa MW: 24051 Da PI: 7.4731 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 83.3 | 3.7e-26 | 4 | 107 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +C++C+vlrr+C+++C++ + p++q++++ +++k++G++ +++ll+++p + ++d+++sl+yeA+ r+ +P+ G++g++l+++++l+++ XP_027357388.1 4 SCNGCRVLRRGCNPNCPIGSSLhwiksPNSQSNATLFLAKFYGRQALINLLTTAPSQLQPDVFKSLLYEACGRIVNPIFGSAGLLLAGSWHLCEA 98 6*********************9************************************************************************ PP DUF260 91 kaelallke 99 +ae++l ++ XP_027357388.1 99 AAEAVLNGA 107 ***998766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MRLSCNGCRV LRRGCNPNCP IGSSLHWIKS PNSQSNATLF LAKFYGRQAL INLLTTAPSQ 60 LQPDVFKSLL YEACGRIVNP IFGSAGLLLA GSWHLCEAAA EAVLNGAPIQ QDHLDGSVSL 120 QPQDCDIRHA VKSGKSRGSD GHHKVKSGTS QFKRRAKKLK ADSSVAELVG VADSGSELGG 180 SVSRDSGSGV TRVSEHKSIG GEGDSNFGEI VEPTPADDGE LELELTLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67100.1 | 6e-57 | LBD family protein |