PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027357197.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 395aa MW: 43674.8 Da PI: 7.3119

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027357197.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.3	1.5e-17	123	168	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+q+G+ +W++Ia++++ gR++k+c++rw++ XP_027357197.1 123 RGHWRPAEDAKLKELVAQFGPQNWNSIAEHLQ-GRSGKSCRLRWFNQ 168 899***************************.*********996 PP
2	Myb_DNA-binding	55.3	1.5e-17	175	218	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++++++eE+e+l+ a+k +G++ W+ I+r ++ gRt++ +k++w+ XP_027357197.1 175 KKAFSEEEEERLLAAHKIYGNK-WAMISRLFP-GRTDNAVKNHWHV 218 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MSNSLHFNSG GYDFCENMNI FPSPHVPSSA SSSYLGIQPP LCSNTFGVMV HDGDTKCERS 60 NIPFQILNPS AFDPREEMVT RETNDEGDEG VENTGLSLKL GEGVESKSRS GTEKIEPTKL 120 CARGHWRPAE DAKLKELVAQ FGPQNWNSIA EHLQGRSGKS CRLRWFNQLD PRINKKAFSE 180 EEEERLLAAH KIYGNKWAMI SRLFPGRTDN AVKNHWHVIM ARKQRDKSYL YKRRKTTFTV 240 PKDLNLPLSN NAGSESTISS TILDESASTC TNLSLTPSSA KPTLRPFLNP SPVQNHQAYG 300 AIMGLSGKSR IPTREAGFDK FFGAWKGSCE AEGPIGRLMG MDQSHYTHSN SSEVSVSESV 360 ATNRTTNLSI SGESENMGDN KDNMPFIDFL GVGAT

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MSNSLHFNSG GYDFCENMNI FPSPHVPSSA SSSYLGIQPP LCSNTFGVMV HDGDTKCERS  60
NIPFQILNPS AFDPREEMVT RETNDEGDEG VENTGLSLKL GEGVESKSRS GTEKIEPTKL  120
CARGHWRPAE DAKLKELVAQ FGPQNWNSIA EHLQGRSGKS CRLRWFNQLD PRINKKAFSE  180
EEEERLLAAH KIYGNKWAMI SRLFPGRTDN AVKNHWHVIM ARKQRDKSYL YKRRKTTFTV  240
PKDLNLPLSN NAGSESTISS TILDESASTC TNLSLTPSSA KPTLRPFLNP SPVQNHQAYG  300
AIMGLSGKSR IPTREAGFDK FFGAWKGSCE AEGPIGRLMG MDQSHYTHSN SSEVSVSESV  360
ATNRTTNLSI SGESENMGDN KDNMPFIDFL GVGAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17800.1	1e-69	MYB family protein