PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027356948.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family M-type_MADS
Protein Properties Length: 272aa    MW: 31148.3 Da    PI: 6.6329
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027356948.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF84.37.2e-27954146
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkl 46
                    k+ien++nrqvtfskRrng++KKA+ELSvLCd++va+i+fs++g+ 
  XP_027356948.1  9 KKIENTTNRQVTFSKRRNGLIKKAYELSVLCDVDVALIMFSPSGRA 54
                    68*****************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MGRVKLQIKK IENTTNRQVT FSKRRNGLIK KAYELSVLCD VDVALIMFSP SGRASLFSGN  60
RSIEEILERY VNLPETEHGR MHNQEHVKKL LTRLKIEADQ ICKAPRPMTP DSQLEEIQRE  120
ISICKSQLEE MEKRLRIFEG DPSEITTLCE AEYREHVLRE TLTQVQLQKV HVPKTVNENG  180
FVTSTSKNPV DWFSQGDPRP QILNFANAYD SAPVRDQQSN NNAVVDMLAP NSTLLHSWEH  240
LRPLGSGSLS IAETTQTREG EQLEQYFSQF IP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22130.11e-51MIKC_MADS family protein