PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027356747.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 341aa    MW: 38364.2 Da    PI: 6.847
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027356747.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding60.82.9e-191562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lvd+++++G g+W++ ++  g++R++k+c++rw +yl
   XP_027356747.1 15 KGPWTPEEDRILVDYIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 62
                     79********************************************97 PP
2Myb_DNA-binding513.2e-1668113148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++++eE++l++++++ lG++ W++Ia +++ gRt++++k+ w+++l
   XP_027356747.1  68 RGKFSEEEQQLIINLHAVLGNK-WSAIAGHLP-GRTDNEIKNLWNTHL 113
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MMGRTPCSDE SGLKKGPWTP EEDRILVDYI QKHGHGSWRA LPKLAGLNRC GKSCRLRWTN  60
YLRPDIKRGK FSEEEQQLII NLHAVLGNKW SAIAGHLPGR TDNEIKNLWN THLKKKLLQM  120
GLDPVTHRPR QDHLSLISNL QQLLAATNIV SNFTNTWDIN ALKLQSDATQ LAKLQLLQNI  180
LQVLGANPTS NLELLNPFGS SSSLPEGFLY EVLGLNNSKL QNLYNSSTGF PSQNQPNFQS  240
FEAPHQQQAL SIGYHHMNGC SDSNCMKFQK VDEQLDAPNS SSTPLNSLPN LVSASPERST  300
LKQMENNVNP NECSSTSTTF EMWGDFMYEE VSDAYWKDLI E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16770.21e-97MYB family protein