PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027356627.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 153aa MW: 16843.4 Da PI: 8.1458

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027356627.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	94.6	1.1e-29	3	103	1	96
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +C++C+vlr++C++ C+l+ ++ p++q++++ +++k+FG++ ++++++++p ++r+++++sl++eA+ r+ +Pv+Gavg++++++++++q+ XP_027356627.1 3 SCNGCRVLRKGCSERCILRSCLqwiqsPQAQAHATLFLAKFFGRTDLMSFISSVPFNKRTALFQSLLFEACGRTVNPVNGAVGLLWSGNWHVCQA 97 6********************************************************************************************** PP DUF260 91 kaelal 96 +++++l XP_027356627.1 98 AVDTVL 103 999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 153 aa Download sequence
MMSCNGCRVL RKGCSERCIL RSCLQWIQSP QAQAHATLFL AKFFGRTDLM SFISSVPFNK 60 RTALFQSLLF EACGRTVNPV NGAVGLLWSG NWHVCQAAVD TVLSGGVIRP LPEFAAPIFG 120 ESDQECCYNS TSSKRGSDDI ISDNEKKLLN LFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49940.1	1e-64	LBD family protein