PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027356512.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 310aa MW: 35046.7 Da PI: 6.7952

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027356512.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.5	2.4e-13	115	166	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i A++++k+L+ XP_027356512.1 115 QRMTHIAVERNRRKQMNEYLAVLRSLMPSS---YVQRGDQASIIGGAINFVKELE 166 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MALEAVVFPQ DPFTYCYKDH LYSNYGFQVA EEEKLLLGII NNNIEQSLHA NWDSSSTSMM 60 QNVKDQWDSH SSPEACTVDQ SITAPFPLPP SSTTTVRRKR RRSKNAKNKE EIENQRMTHI 120 AVERNRRKQM NEYLAVLRSL MPSSYVQRGD QASIIGGAIN FVKELEQLLQ SMESQRKTNE 180 NIGLNGSSPF AEFFTFPQYT KQSNNGGATM AENQAQKQWA VADIEVTMVD SHANLKILSK 240 KRTGLLMKMV VGLQGLRFTI LHLNVTTLDD MALYSVSVKV EDGCQLNTVD EIAAAVNQLL 300 RRVQEEVTFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	98	102	RKRRR
2	98	103	RKRRRS
3	98	105	RKRRRSKN
4	116	127	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	9e-94	bHLH family protein