PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027356466.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HSF

Protein Properties

Length: 364aa MW: 41085 Da PI: 8.3792

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027356466.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.6	6.2e-36	25	117	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d+++++++sw e+ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ Fkkg+k+ll++ XP_027356466.1 25 FLTKTYQLVDDPTTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANEFFKKGEKHLLCE 110 9***************************************************************99.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i+r+k++ XP_027356466.1 111 IHRRKTA 117 **986 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MALLLDNCEG ILLSLDSHKS VPAPFLTKTY QLVDDPTTDH IVSWGEDDTT FVVWRPPEFA 60 RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KKGEKHLLCE IHRRKTAQPQ 120 QGSMNHHHHH HQHHSHSPLG INVPSFFPFS TRVSISPSNE SDEQANWCDS PPRGPSSVVN 180 GVSNYNTSVT ALSEDNERLR RSNNMLMSEL AHMKKLYNDI IYFVQNHVKP VAPSNSYSSS 240 FILCNTPQAT PISSGNVSMM QRPMNQLLGY YSTNPKQATT HSQPQPQTYV VNSPTNTSRS 300 SITIVEGPSS NSCKTKLFGV SLQSKKRVHP DYGSNNPTNS ETNKARLVLE KDDLGLNLMP 360 PSTC

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MALLLDNCEG ILLSLDSHKS VPAPFLTKTY QLVDDPTTDH IVSWGEDDTT FVVWRPPEFA  60
RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KKGEKHLLCE IHRRKTAQPQ  120
QGSMNHHHHH HQHHSHSPLG INVPSFFPFS TRVSISPSNE SDEQANWCDS PPRGPSSVVN  180
GVSNYNTSVT ALSEDNERLR RSNNMLMSEL AHMKKLYNDI IYFVQNHVKP VAPSNSYSSS  240
FILCNTPQAT PISSGNVSMM QRPMNQLLGY YSTNPKQATT HSQPQPQTYV VNSPTNTSRS  300
SITIVEGPSS NSCKTKLFGV SLQSKKRVHP DYGSNNPTNS ETNKARLVLE KDDLGLNLMP  360
PSTC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	1e-121	HSF family protein