PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027356260.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 202aa MW: 22938.6 Da PI: 8.1974 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 81.8 | 4.4e-26 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien rqvtf+kRr+g+lKKA+ELSvLCdae+ ++ifs +gklye + XP_027356260.1 9 KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLVIFSAHGKLYELA 58 79*********************************************965 PP | |||||||
2 | K-box | 54.3 | 5.8e-19 | 86 | 173 | 12 | 99 |
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 a+ ++e + Lk+eie+Lq+ +R l + +++++ eLq Le++Le + +iRs K+++ll++i+ l+ ke l+ +nk+L+ k+ XP_027356260.1 86 ADPLDAKEETNVLKQEIETLQKGIRYLFEGGNGTMTIDELQVLEKNLEVWIYHIRSMKMNILLQEIQALRDKEGTLKATNKYLHDKMV 173 55566789********************9999****************************************************9975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MARGKVQLKR IENPVHRQVT FCKRRAGLLK KAKELSVLCD AEIGLVIFSA HGKLYELATK 60 GTMQGLIERY MKFTGGPQPE AVTTEADPLD AKEETNVLKQ EIETLQKGIR YLFEGGNGTM 120 TIDELQVLEK NLEVWIYHIR SMKMNILLQE IQALRDKEGT LKATNKYLHD KMVENTALTT 180 FTPFATDTSY PLIIQDGAFQ LY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71692.1 | 2e-82 | MIKC_MADS family protein |