PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027356129.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 255aa MW: 29130.4 Da PI: 7.1542 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 87.9 | 5.7e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien rqvtfskRr+g+lKKA+EL +LCdaevaviifs+tgk++e+ss XP_027356129.1 9 KRIENANSRQVTFSKRRTGLLKKAQELAILCDAEVAVIIFSNTGKMFEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 65.1 | 2.4e-22 | 81 | 172 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +e +++++ ++ ++ Lk+e+ +L+ +q +llG+dL+ L lkeLq+LeqqL+++l +++++K+ell+eq+e+++ +e+++ en++Lr+++ee XP_027356129.1 81 VEYKTEKEDSKMVEILKDEVAKLEAKQLRLLGKDLTGLGLKELQHLEQQLNEGLLSVKERKEELLMEQLEQSRVQEQRALLENETLRRQVEE 172 66677788899999***************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MGRGKIEIKR IENANSRQVT FSKRRTGLLK KAQELAILCD AEVAVIIFSN TGKMFEFSSS 60 SMKRTLARYN KCTDSSEAAV VEYKTEKEDS KMVEILKDEV AKLEAKQLRL LGKDLTGLGL 120 KELQHLEQQL NEGLLSVKER KEELLMEQLE QSRVQEQRAL LENETLRRQV EELRCLFPLT 180 ERVVPSYLQY HHMERKNAIL DNSVKCLNLT SNCANEKGDS DTTLHLGLPS DVHHKCKAPE 240 KETFSNDSES HVVLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13790.1 | 6e-80 | MIKC_MADS family protein |