PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027356113.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 226aa MW: 26286 Da PI: 9.6458 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.9 | 7.4e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvt+skRrng++KKA+EL vLCda+v++i+fsstgkl+ey+s XP_027356113.1 9 KRIENTTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYIS 59 79***********************************************86 PP | |||||||
2 | K-box | 88.2 | 1.5e-29 | 71 | 169 | 1 | 99 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 yq + g +l+++++es+q++l+kLk+ ++nL++e+R+++G++L++ ++++L+ Le++++k+ k +R++K++++++qi++++kk ++ +e +++L XP_027356113.1 71 YQMTLGIDLWSSHYESMQENLKKLKEVNRNLRKEIRQRMGDCLNDVNMEDLRLLEEEMDKAAKVVRERKYKVITNQIDTQRKKFNNEREVHNRLL 165 67778889*************************************************************************************99 PP K-box 96 kkle 99 + l+ XP_027356113.1 166 RDLD 169 8875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MARGKIQIKR IENTTNRQVT YSKRRNGLFK KANELTVLCD AKVSIIMFSS TGKLHEYISP 60 STSTKQFFDQ YQMTLGIDLW SSHYESMQEN LKKLKEVNRN LRKEIRQRMG DCLNDVNMED 120 LRLLEEEMDK AAKVVRERKY KVITNQIDTQ RKKFNNEREV HNRLLRDLDA RAEDPRYGLI 180 DNGGEYESVM GFSNLGPRMF ALSLQPTHPN AHCGAGSDLT TYPLLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 7e-90 | MIKC_MADS family protein |