PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027355980.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 547aa    MW: 60953.8 Da    PI: 6.5514
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027355980.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS413.51.8e-1261775461373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL+ cA+a+s+++++   +l+++ +  +s +g+p+qRl ay++e+L ar   s++++y+al++ e +    ++ l+++++++e++P+lkf++
  XP_027355980.1 177 LKQLLIVCAKALSDNNMKDFAQLIEKGKSVVSITGEPIQRLGAYLVEGLVARKEASGNNIYRALRCGEPE---GKDLLSYMQMLYEICPYLKFGY 268
                     679******************************************************************9...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     ++aN aI ea   e+ +HiiDf+i+qG+QW++LlqaLa+Rp+g+p++RiTg+++p s+  +   le++g+rLa + ++ ++p+ef+  v     +
  XP_027355980.1 269 MAANGAIAEACRDEDFIHIIDFQIGQGIQWMTLLQALAARPGGAPHVRITGIDDPVSKyaRGGGLEAVGKRLAVISQTYNIPVEFHG-VPVLAPN 362
                     *******************************************************99999999************************.6778899 PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++ ++L+++pgEalaVn+ lqlh++ desv+++++rd +L+lvkslsPkv ++veqe+++n+++F++rf+e+l+yy a+f+s++++l+r+++eri
  XP_027355980.1 363 VTRNMLDIRPGEALAVNFPLQLHHTADESVDVSNPRDGLLRLVKSLSPKVTTLVEQESNTNTTPFFNRFVETLDYYLAIFESIDVSLSRKTKERI 457
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     +vE+++l+r+ivn++aceg+er+erhe l+kW++rl++aGF+++pls+++++ +++llr ++ + y++ e++g+++lgWk+r+L+s+SaW
  XP_027355980.1 458 NVEQHCLARDIVNIIACEGKERVERHELLGKWKSRLTMAGFRQYPLSSYVNSVIRSLLRCYS-EHYNLVEKDGAMLLGWKNRNLISASAW 546
                     **********************************************************9999.66************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 547 aa     Download sequence    
MDSNQFFRVT SSAGIPYTSS YLPISPIPNR FLGSSKLDIG NSPNSSLFTH FDSETISSAL  60
SDSQEQHSSG EIHSGSNPSC NSFQDSKHFL QDSVHLSARS FLGHDASYAH ENRHSFLELE  120
TVLMAPDGDD QVTTSNTSGQ RNRFCSHECQ SSEVAYVEKH HKSMEEASIE RFPSSNLKQL  180
LIVCAKALSD NNMKDFAQLI EKGKSVVSIT GEPIQRLGAY LVEGLVARKE ASGNNIYRAL  240
RCGEPEGKDL LSYMQMLYEI CPYLKFGYMA ANGAIAEACR DEDFIHIIDF QIGQGIQWMT  300
LLQALAARPG GAPHVRITGI DDPVSKYARG GGLEAVGKRL AVISQTYNIP VEFHGVPVLA  360
PNVTRNMLDI RPGEALAVNF PLQLHHTADE SVDVSNPRDG LLRLVKSLSP KVTTLVEQES  420
NTNTTPFFNR FVETLDYYLA IFESIDVSLS RKTKERINVE QHCLARDIVN IIACEGKERV  480
ERHELLGKWK SRLTMAGFRQ YPLSSYVNSV IRSLLRCYSE HYNLVEKDGA MLLGWKNRNL  540
ISASAWY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-178GRAS family protein