PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027355869.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

AP2

Protein Properties

Length: 678aa MW: 74711.1 Da PI: 7.2147

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027355869.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.9	3.9e-16	320	379	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_027355869.1 320 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 379 78*****************988886678446***********************98 PP
2	AP2	45.2	2.3e-14	424	473	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_027355869.1 424 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDVAAIKFRG 473 9*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 678 aa Download sequence
MKAMNDSNND DGNNHNWLGF SLSPQMKMEV TSGPPQHHHH HHYQAQASAS ATISNTIPTT 60 FYLSSSHLGN SGICYGVGEN SNFHSPLTVM PLKSDGSLCI MEALGRSQTQ VMVPTSSPKL 120 EDFLGGATMG THEYGGHERG ETMALSLDSI YYNTQNAEAQ PNRDHSLDLL SEPFRQQGHM 180 NVQSHPYYSS GLACHGIYQT PIEEETKETQ VAVCSTQMPQ MTEEGLKNWV APREYSAQLA 240 LEQQMNCGTG NDRVSLGTVG CGELQSLSLS MSPGSQSSCV TAPSGTDSVA MDAKKRGHAK 300 LGQKQPVHRK SIDTFGQRTS QYRGVTRHRW TGRYEAHLWD NSCKKEGQTR KGRQVYLGGY 360 DMEEKAARAY DLAALKYWGP STHINFPLEN YQAELEEMKN MTRQEYVAHL RRKSSGFSRG 420 ASMYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTQEEA AEAYDVAAIK FRGVSAVTNF 480 DISRYDVERI MASNTLLAGE LARRNKDSDL RTEAIDYNIG VTSQNNVDAV QARNNNEKDS 540 QWKMALFNHH SQQQSNGCDQ KTINCGNYRN SALSVALQDL IGIDSAGSGQ PMLDESSKIG 600 THFSNPSSLV TSLSSSREPS PDKTGPSLLF PKPPMEAKIV NPIVTGVSSW FPSPAVQMRP 660 ASAIALSHLP VFAAWNDT

Sequence ? help Back to Top

Protein Sequence Length: 678 aa Download sequence

MKAMNDSNND DGNNHNWLGF SLSPQMKMEV TSGPPQHHHH HHYQAQASAS ATISNTIPTT  60
FYLSSSHLGN SGICYGVGEN SNFHSPLTVM PLKSDGSLCI MEALGRSQTQ VMVPTSSPKL  120
EDFLGGATMG THEYGGHERG ETMALSLDSI YYNTQNAEAQ PNRDHSLDLL SEPFRQQGHM  180
NVQSHPYYSS GLACHGIYQT PIEEETKETQ VAVCSTQMPQ MTEEGLKNWV APREYSAQLA  240
LEQQMNCGTG NDRVSLGTVG CGELQSLSLS MSPGSQSSCV TAPSGTDSVA MDAKKRGHAK  300
LGQKQPVHRK SIDTFGQRTS QYRGVTRHRW TGRYEAHLWD NSCKKEGQTR KGRQVYLGGY  360
DMEEKAARAY DLAALKYWGP STHINFPLEN YQAELEEMKN MTRQEYVAHL RRKSSGFSRG  420
ASMYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTQEEA AEAYDVAAIK FRGVSAVTNF  480
DISRYDVERI MASNTLLAGE LARRNKDSDL RTEAIDYNIG VTSQNNVDAV QARNNNEKDS  540
QWKMALFNHH SQQQSNGCDQ KTINCGNYRN SALSVALQDL IGIDSAGSGQ PMLDESSKIG  600
THFSNPSSLV TSLSSSREPS PDKTGPSLLF PKPPMEAKIV NPIVTGVSSW FPSPAVQMRP  660
ASAIALSHLP VFAAWNDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-158	AP2 family protein