PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027355705.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 315aa    MW: 35279.3 Da    PI: 6.1016
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027355705.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.85.7e-141865148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEd++l ++    G g+W+ +ar  g+ R++k+c++rw +yl
   XP_027355705.1 18 KGLWSPEEDDKLMNYMLNSGQGCWSDVARNAGLQRCGKSCRLRWINYL 65
                     678*******************************************97 PP
2Myb_DNA-binding52.41.2e-1671114146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+++++E+el+++++ +lG++ W+ Ia++++ gRt++++k++w++
   XP_027355705.1  71 RGAFSPQEEELIIHLHSLLGNR-WSQIAARLP-GRTDNEIKNFWNS 114
                      89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MRKPEPSGKN NSNNKLRKGL WSPEEDDKLM NYMLNSGQGC WSDVARNAGL QRCGKSCRLR  60
WINYLRPDLK RGAFSPQEEE LIIHLHSLLG NRWSQIAARL PGRTDNEIKN FWNSTIKKRL  120
KNLSSTTSPN ASESSYEPKF TTCTQDHHAD FMPMFSSSSP SSSMHATVLN SIIDRLPMLE  180
HGLNMPVPAS TGFFNATGPC FSHSSGVDNK GFYMEKGGVF GSGAEGDMYI PPLESVSTFS  240
DHNLKVESTC NTDTNNSYFD DINSIVNNCN VSNNKKGENR AGVENLFQEE LTMGEWDLEE  300
LMKDVSSFPF LDFSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12870.13e-62MYB family protein