PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027355566.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 1006aa MW: 110920 Da PI: 4.8816 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.4 | 8e-19 | 37 | 83 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l XP_027355566.1 37 KGQWTPEEDEILRKAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 83 799****************************9.************986 PP | |||||||
2 | Myb_DNA-binding | 65.9 | 7.4e-21 | 89 | 135 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde+++++v+++G++ W+tIa++++ gR +kqc++rw+++l XP_027355566.1 89 KGPWSKEEDEIIIELVNKYGPKKWSTIAQHLP-GRIGKQCRERWHNHL 135 79******************************.*************97 PP | |||||||
3 | Myb_DNA-binding | 53.3 | 6.2e-17 | 141 | 183 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE++ l++a++ +G++ W+ a+ ++ gRt++ +k++w+ XP_027355566.1 141 KEAWTQEEELALIRAHQIYGNR-WAELAKLLP-GRTDNAIKNHWN 183 579*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1006 aa Download sequence |
MDSDRATPAP SDGFADGVQK IRALHGRTTG PTRRSTKGQW TPEEDEILRK AVQRFKGKNW 60 KKIAECFKDR TDVQCLHRWQ KVLNPELVKG PWSKEEDEII IELVNKYGPK KWSTIAQHLP 120 GRIGKQCRER WHNHLNPTIN KEAWTQEEEL ALIRAHQIYG NRWAELAKLL PGRTDNAIKN 180 HWNSSVKKKL DSYLASGLLA QLQNVPLVGN PNQPIASTSS RMPYSGDDNG PRGNEGEEVS 240 QCSQESANAS HFPSAGEMSS VVLQNTDEYR LNEESNLGKD YSPGQASCSE PYFVSLDEVT 300 ASLSDIAGQE VCTSHFIDQK YSHEPSNSTN GDCQLDLLAL TNYSSLDLGQ ESSQLQNDCI 360 AHGESHEVVN VPYQTLVGLG VVTSMGPTSM DSVKQDNMLI TDDECCRILF SEAMSDECFS 420 SGDYNTAINM VDLSGCTSFL CRSLLPSVQP VVSSTGDTLM HTTEANRLVG SEDQHFVSRA 480 HDNLIYANEL STSPCIDRID AAEMQEPSDV VKDNSKLVPV NSLGSKSDAM QTSYPTNETP 540 NVHTKQEDIG GLCYEPPRFP SLDIPFLSCD LIQSGGDMQQ EFSPLGIRQL MMSSMNCLTP 600 FRLWDSPSHD NSPDALLKSA AKTFTATPSI IKKRHRDLLS PLSDKRIDKK LEIDMTSTLI 660 KDFSRLDVMF DDNETQGADL LSPSSMQNMK AFSAEDGKEN HGQSFRVEVE KNKSAILDDK 720 KSEKGLGDSN SPDKIMQQPL DVDSKMNGVR TAADVVQQPS GVLVEHDMND LLLYGTDQIN 780 LKSERVLSSS ARTQKNPCSR VNSPTIRVKE NERLSIAVTC VQSVSSSGPG ENSGDHAGKD 840 GGFETCSIFG GTPFKKSLES PSAWKSPWFI NTFLSSPRID TEITIEDFGY LLSPGDKSYD 900 AIGLMKQISE QTAAQYANIH EILGNETPKA LLVDASGNHR DEDQENDDPN KQHGNHSPLS 960 QLASNALVER RILDFSECET PGKGDNSKSS SMSFSSPSSY LLKGCR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32730.2 | 0.0 | MYB family protein |