PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027355565.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 1006aa MW: 110920 Da PI: 4.8816

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027355565.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.4	8e-19	37	83	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l XP_027355565.1 37 KGQWTPEEDEILRKAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 83 799**************************9.**********986 PP
2	Myb_DNA-binding	65.9	7.4e-21	89	135	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde+++++v+++G++ W+tIa++++ gR +kqc++rw+++l XP_027355565.1 89 KGPWSKEEDEIIIELVNKYGPKKWSTIAQHLP-GRIGKQCRERWHNHL 135 79****************************.***********97 PP
3	Myb_DNA-binding	53.3	6.2e-17	141	183	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE++ l++a++ +G++ W+ a+ ++ gRt++ +k++w+ XP_027355565.1 141 KEAWTQEEELALIRAHQIYGNR-WAELAKLLP-GRTDNAIKNHWN 183 579*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1006 aa Download sequence
MDSDRATPAP SDGFADGVQK IRALHGRTTG PTRRSTKGQW TPEEDEILRK AVQRFKGKNW 60 KKIAECFKDR TDVQCLHRWQ KVLNPELVKG PWSKEEDEII IELVNKYGPK KWSTIAQHLP 120 GRIGKQCRER WHNHLNPTIN KEAWTQEEEL ALIRAHQIYG NRWAELAKLL PGRTDNAIKN 180 HWNSSVKKKL DSYLASGLLA QLQNVPLVGN PNQPIASTSS RMPYSGDDNG PRGNEGEEVS 240 QCSQESANAS HFPSAGEMSS VVLQNTDEYR LNEESNLGKD YSPGQASCSE PYFVSLDEVT 300 ASLSDIAGQE VCTSHFIDQK YSHEPSNSTN GDCQLDLLAL TNYSSLDLGQ ESSQLQNDCI 360 AHGESHEVVN VPYQTLVGLG VVTSMGPTSM DSVKQDNMLI TDDECCRILF SEAMSDECFS 420 SGDYNTAINM VDLSGCTSFL CRSLLPSVQP VVSSTGDTLM HTTEANRLVG SEDQHFVSRA 480 HDNLIYANEL STSPCIDRID AAEMQEPSDV VKDNSKLVPV NSLGSKSDAM QTSYPTNETP 540 NVHTKQEDIG GLCYEPPRFP SLDIPFLSCD LIQSGGDMQQ EFSPLGIRQL MMSSMNCLTP 600 FRLWDSPSHD NSPDALLKSA AKTFTATPSI IKKRHRDLLS PLSDKRIDKK LEIDMTSTLI 660 KDFSRLDVMF DDNETQGADL LSPSSMQNMK AFSAEDGKEN HGQSFRVEVE KNKSAILDDK 720 KSEKGLGDSN SPDKIMQQPL DVDSKMNGVR TAADVVQQPS GVLVEHDMND LLLYGTDQIN 780 LKSERVLSSS ARTQKNPCSR VNSPTIRVKE NERLSIAVTC VQSVSSSGPG ENSGDHAGKD 840 GGFETCSIFG GTPFKKSLES PSAWKSPWFI NTFLSSPRID TEITIEDFGY LLSPGDKSYD 900 AIGLMKQISE QTAAQYANIH EILGNETPKA LLVDASGNHR DEDQENDDPN KQHGNHSPLS 960 QLASNALVER RILDFSECET PGKGDNSKSS SMSFSSPSSY LLKGCR

Sequence ? help Back to Top

Protein Sequence Length: 1006 aa Download sequence

MDSDRATPAP SDGFADGVQK IRALHGRTTG PTRRSTKGQW TPEEDEILRK AVQRFKGKNW  60
KKIAECFKDR TDVQCLHRWQ KVLNPELVKG PWSKEEDEII IELVNKYGPK KWSTIAQHLP  120
GRIGKQCRER WHNHLNPTIN KEAWTQEEEL ALIRAHQIYG NRWAELAKLL PGRTDNAIKN  180
HWNSSVKKKL DSYLASGLLA QLQNVPLVGN PNQPIASTSS RMPYSGDDNG PRGNEGEEVS  240
QCSQESANAS HFPSAGEMSS VVLQNTDEYR LNEESNLGKD YSPGQASCSE PYFVSLDEVT  300
ASLSDIAGQE VCTSHFIDQK YSHEPSNSTN GDCQLDLLAL TNYSSLDLGQ ESSQLQNDCI  360
AHGESHEVVN VPYQTLVGLG VVTSMGPTSM DSVKQDNMLI TDDECCRILF SEAMSDECFS  420
SGDYNTAINM VDLSGCTSFL CRSLLPSVQP VVSSTGDTLM HTTEANRLVG SEDQHFVSRA  480
HDNLIYANEL STSPCIDRID AAEMQEPSDV VKDNSKLVPV NSLGSKSDAM QTSYPTNETP  540
NVHTKQEDIG GLCYEPPRFP SLDIPFLSCD LIQSGGDMQQ EFSPLGIRQL MMSSMNCLTP  600
FRLWDSPSHD NSPDALLKSA AKTFTATPSI IKKRHRDLLS PLSDKRIDKK LEIDMTSTLI  660
KDFSRLDVMF DDNETQGADL LSPSSMQNMK AFSAEDGKEN HGQSFRVEVE KNKSAILDDK  720
KSEKGLGDSN SPDKIMQQPL DVDSKMNGVR TAADVVQQPS GVLVEHDMND LLLYGTDQIN  780
LKSERVLSSS ARTQKNPCSR VNSPTIRVKE NERLSIAVTC VQSVSSSGPG ENSGDHAGKD  840
GGFETCSIFG GTPFKKSLES PSAWKSPWFI NTFLSSPRID TEITIEDFGY LLSPGDKSYD  900
AIGLMKQISE QTAAQYANIH EILGNETPKA LLVDASGNHR DEDQENDDPN KQHGNHSPLS  960
QLASNALVER RILDFSECET PGKGDNSKSS SMSFSSPSSY LLKGCR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	0.0	MYB family protein