PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027355451.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 230aa MW: 26032.3 Da PI: 10.2388 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 83.1 | 1.8e-26 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 k+i+nk rqvtfskRr g++KKAeELSvLCdae+ +i+fs tgkl++y XP_027355451.1 9 KKIDNKAARQVTFSKRRRGLFKKAEELSVLCDAEIGLIVFSATGKLFDYG 58 68*********************************************995 PP | |||||||
2 | K-box | 53.3 | 1.2e-18 | 81 | 169 | 11 | 99 |
K-box 11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + + + +++ akL kei + + +++G+dL+ L+l+ L+qLe+ Lek+l+++ + K++ ++++i++lqkk el+e+nk L++kl XP_027355451.1 81 SPEPQLVDNNNAKLSKEIADRSQVLSQMKGDDLQGLDLNKLRQLEKTLEKGLNRVIEIKEKRIMSEISDLQKKGIELEEKNKHLKQKLV 169 556677889999**************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MTRKKIKIKK IDNKAARQVT FSKRRRGLFK KAEELSVLCD AEIGLIVFSA TGKLFDYGSS 60 SMKDIITRYY RHSHVINTRP SPEPQLVDNN NAKLSKEIAD RSQVLSQMKG DDLQGLDLNK 120 LRQLEKTLEK GLNRVIEIKE KRIMSEISDL QKKGIELEEK NKHLKQKLVE MQIEAMLGKA 180 KVPSLVGSNM KMQEGVSLET MNGIRSCIND LPLEDGSSDT ALKLGLPFFN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-67 | MIKC_MADS family protein |