PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027355204.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 840aa    MW: 92218.5 Da    PI: 6.4268
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027355204.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.36.5e-192078357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+l++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_027355204.1 20 KYVRYTPEQVEALERLYHECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 78
                    5679*****************************************************97 PP
2START173.91e-541643722205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  ++a  v+e+l+d+  W ++++ +++l+v s+g  g+++l 
  XP_027355204.1 164 IAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPA-RVAEILKDRHSWFRDCRTVDVLNVMSTGngGTIELL 257
                     7899******************************************************.8899999999************************** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++l+a+++l+p Rdf+ +Ry+  l++g++v++++S++++q+ p     +++vRa +lpSg+li+p+++g+s +++v+h+ l+ ++++++lr+l+
  XP_027355204.1 258 YMQLYAPTTLAPgRDFWLLRYTSLLEDGSLVVCERSLNNTQNGPAmppVQHFVRADMLPSGYLIRPCEGGGSIIHIVDHMVLEPWSVPEVLRPLY 352
                     ******************************************99988899********************************************* PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s++  +++t++a+l+++++
  XP_027355204.1 353 ESSMLLAQRTTMAALRHLRQ 372
                     ***************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 840 aa     Download sequence    
MMAVSSACKD GSKVAMDNGK YVRYTPEQVE ALERLYHECP KPSSLRRQQL IRECPILSNI  60
EPKQIKVWFQ NRRCREKQRK EASRLQAVNR KLTAMNKLLM EENDRLQKQV SQLVYENSFF  120
RQQTQNASLA TTDTSCESVV TSGQRHLTPQ HPPRDASPAG LLSIAEETLA EFLSKATGTA  180
VEWVQMPGMK PGPDSIGIVA ISHGCPGVAA RACGLVGLEP ARVAEILKDR HSWFRDCRTV  240
DVLNVMSTGN GGTIELLYMQ LYAPTTLAPG RDFWLLRYTS LLEDGSLVVC ERSLNNTQNG  300
PAMPPVQHFV RADMLPSGYL IRPCEGGGSI IHIVDHMVLE PWSVPEVLRP LYESSMLLAQ  360
RTTMAALRHL RQISQEVSQP SVTGWGRRPA ALRALSQRLS KGFNEAVNGF ADDGWSMLES  420
DGIDDVTLLV NSSPSKMMGV NVGYNNGFPS MSSSVLCAKA SMLLQNVPPA ILLRFLREHR  480
SEWADSSIDA YSAAAIKAGP CSLPGARAGG FGGQVILPLA HTIEHEEFME VIKLENMGYY  540
RDDMTIPGDV FLLQLCSGVD EHAVGTSAEL VFAPIDASFS DDAPILPSGF RIIPLDSGTD  600
AASPNRTLDL ASALEVGTTA ANKTAGENSG HSGSTKSVMT IAFQFAFEVH LQDNIATMAR  660
QYVRSIIASV QRVSLALSPS RFGAHNAFHL PPGTPEAQTL ARWICNSYRF YLGVELLKSE  720
GSESILKSLW HHSDAVLCCS LKALPVFTFA NQAGLDMLET TLVALQDITL EKIFDDNGKK  780
TLCSEFPQIM QQGFMCIQGG ICLSSMGRPV SYERAVAWKV LNEEESAHCI CFMFINWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32880.10.0HD-ZIP family protein