PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027354477.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GATA
Protein Properties Length: 341aa    MW: 37207 Da    PI: 4.6059
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027354477.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA48.89.8e-16192228135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg+ +  Tp +Rrgp g++tLCnaCGl+++ kg+
  XP_027354477.1 192 CQHCGVNEnnTPAMRRGPAGPRTLCNACGLMWANKGT 228
                     *******999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MATLNSQPLQ FEDPAIAVND DDDGGVADVM DELEDVNVNS VNVASAKHDA VAMPSRTSEL  60
TLSFEGEVYV FPAVTPQKVQ AVLLLLGGRD VQADMPTVEL PFDQSNRGMG DTPKRSNLSR  120
RIASLVRFRE KRKERCFDKK IRYSVRKEVA QRMHRKNGQF ASLKESSGSS NWDSAQSSGH  180
DGTPHSESLR RCQHCGVNEN NTPAMRRGPA GPRTLCNACG LMWANKGTLR DLSKGGRNLS  240
VEQSDLDTPV DVKPTVPEEE LPSIHDEQGI SEDPSKAIAA DGSSNHAVNP SEEELPETAE  300
HFTNTMPLGI GHSSANDDEQ EPLVELSNPS YTDIDLPGNF D
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1111116DTPKRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.24e-72GATA family protein