PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027354366.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 548aa MW: 60070.4 Da PI: 4.753

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027354366.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.7	5.4e-18	37	84	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed++lvd+v+++G g+W+++ ++ g+ R++k+c++rw ++l XP_027354366.1 37 KGPWTSAEDDILVDYVNKHGEGNWNAVQKHTGLLRCGKSCRLRWANHL 84 79****************************99********9986 PP
2	Myb_DNA-binding	50.3	5.4e-16	90	133	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T eE+ l++++++++G++ W++ a++++ gRt++++k++w++ XP_027354366.1 90 KGAFTSEEERLIAELHAKMGNK-WARMAAHLP-GRTDNEIKNYWNT 133 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 548 aa Download sequence
MRKMNNEVED EVLPNDQSGS QLNDEGYDGS AGVVLKKGPW TSAEDDILVD YVNKHGEGNW 60 NAVQKHTGLL RCGKSCRLRW ANHLRPNLKK GAFTSEEERL IAELHAKMGN KWARMAAHLP 120 GRTDNEIKNY WNTRIKRRQR AGLPLYPPDV CLQDLQESQR GQSTGGLNGG NKMHPDFLQK 180 NSFEIHDAIF DSLKDNHGIL PYVPELPDIS AYGNMLKGLD SSQYCSFVPP TSPKHKRLRE 240 STMPFIDSSD MNRNGLYPFD QIQDNNSDEI AQSFGMQAPL DHGPSSHSSI CYSHSLSNGN 300 SSTSKPTFEA AKLELPSLQY PELDLGSWGT SPPPPLLESV DDFIQSPTPI STLDSDCSLQ 360 NSGLLDALLY QAKTLSSSKN HYSDKSSNSS TATLVDRPDS SALNVYETEW EDYADPVSPF 420 GATSILNECP ALGANVNSLD EQPIQAFNGN IVKLESVDQI WTPNSENQAV SLLNITRPDF 480 LLASDWHDLG SGDGKNQAIT ADASTTLLGD DYKHMTAGNS KSSQAWGFGS CATAINNMPA 540 VCQVSDLG

Sequence ? help Back to Top

Protein Sequence Length: 548 aa Download sequence

MRKMNNEVED EVLPNDQSGS QLNDEGYDGS AGVVLKKGPW TSAEDDILVD YVNKHGEGNW  60
NAVQKHTGLL RCGKSCRLRW ANHLRPNLKK GAFTSEEERL IAELHAKMGN KWARMAAHLP  120
GRTDNEIKNY WNTRIKRRQR AGLPLYPPDV CLQDLQESQR GQSTGGLNGG NKMHPDFLQK  180
NSFEIHDAIF DSLKDNHGIL PYVPELPDIS AYGNMLKGLD SSQYCSFVPP TSPKHKRLRE  240
STMPFIDSSD MNRNGLYPFD QIQDNNSDEI AQSFGMQAPL DHGPSSHSSI CYSHSLSNGN  300
SSTSKPTFEA AKLELPSLQY PELDLGSWGT SPPPPLLESV DDFIQSPTPI STLDSDCSLQ  360
NSGLLDALLY QAKTLSSSKN HYSDKSSNSS TATLVDRPDS SALNVYETEW EDYADPVSPF  420
GATSILNECP ALGANVNSLD EQPIQAFNGN IVKLESVDQI WTPNSENQAV SLLNITRPDF  480
LLASDWHDLG SGDGKNQAIT ADASTTLLGD DYKHMTAGNS KSSQAWGFGS CATAINNMPA  540
VCQVSDLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.3	1e-120	MYB family protein