PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027354365.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 556aa MW: 61066.7 Da PI: 4.8577

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027354365.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.7	5.5e-18	45	92	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed++lvd+v+++G g+W+++ ++ g+ R++k+c++rw ++l XP_027354365.1 45 KGPWTSAEDDILVDYVNKHGEGNWNAVQKHTGLLRCGKSCRLRWANHL 92 79****************************99********9986 PP
2	Myb_DNA-binding	50.3	5.5e-16	98	141	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T eE+ l++++++++G++ W++ a++++ gRt++++k++w++ XP_027354365.1 98 KGAFTSEEERLIAELHAKMGNK-WARMAAHLP-GRTDNEIKNYWNT 141 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 556 aa Download sequence
MFGQKLYKMR KMNNEVEDEV LPNDQSGSQL NDEGYDGSAG VVLKKGPWTS AEDDILVDYV 60 NKHGEGNWNA VQKHTGLLRC GKSCRLRWAN HLRPNLKKGA FTSEEERLIA ELHAKMGNKW 120 ARMAAHLPGR TDNEIKNYWN TRIKRRQRAG LPLYPPDVCL QDLQESQRGQ STGGLNGGNK 180 MHPDFLQKNS FEIHDAIFDS LKDNHGILPY VPELPDISAY GNMLKGLDSS QYCSFVPPTS 240 PKHKRLREST MPFIDSSDMN RNGLYPFDQI QDNNSDEIAQ SFGMQAPLDH GPSSHSSICY 300 SHSLSNGNSS TSKPTFEAAK LELPSLQYPE LDLGSWGTSP PPPLLESVDD FIQSPTPIST 360 LDSDCSLQNS GLLDALLYQA KTLSSSKNHY SDKSSNSSTA TLVDRPDSSA LNVYETEWED 420 YADPVSPFGA TSILNECPAL GANVNSLDEQ PIQAFNGNIV KLESVDQIWT PNSENQAVSL 480 LNITRPDFLL ASDWHDLGSG DGKNQAITAD ASTTLLGDDY KHMTAGNSKS SQAWGFGSCA 540 TAINNMPAVC QVSDLG

Sequence ? help Back to Top

Protein Sequence Length: 556 aa Download sequence

MFGQKLYKMR KMNNEVEDEV LPNDQSGSQL NDEGYDGSAG VVLKKGPWTS AEDDILVDYV  60
NKHGEGNWNA VQKHTGLLRC GKSCRLRWAN HLRPNLKKGA FTSEEERLIA ELHAKMGNKW  120
ARMAAHLPGR TDNEIKNYWN TRIKRRQRAG LPLYPPDVCL QDLQESQRGQ STGGLNGGNK  180
MHPDFLQKNS FEIHDAIFDS LKDNHGILPY VPELPDISAY GNMLKGLDSS QYCSFVPPTS  240
PKHKRLREST MPFIDSSDMN RNGLYPFDQI QDNNSDEIAQ SFGMQAPLDH GPSSHSSICY  300
SHSLSNGNSS TSKPTFEAAK LELPSLQYPE LDLGSWGTSP PPPLLESVDD FIQSPTPIST  360
LDSDCSLQNS GLLDALLYQA KTLSSSKNHY SDKSSNSSTA TLVDRPDSSA LNVYETEWED  420
YADPVSPFGA TSILNECPAL GANVNSLDEQ PIQAFNGNIV KLESVDQIWT PNSENQAVSL  480
LNITRPDFLL ASDWHDLGSG DGKNQAITAD ASTTLLGDDY KHMTAGNSKS SQAWGFGSCA  540
TAINNMPAVC QVSDLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.3	1e-120	MYB family protein