PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027354257.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family BBR-BPC
Protein Properties Length: 337aa    MW: 37281.2 Da    PI: 9.9993
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027354257.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind405.75.8e-12413371301
       GAGA_bind   1 mdddgsre..rnkg.yyepa..aslkenl..glqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllve 88 
                     mdd g+re  r+k+ +y++a  + l +++   +q+m+++aerda+i+ernlalsekkaa+aerd+aflqrd+a+aern+a++erdn++++l+++e
  XP_027354257.1   1 MDDAGHREngRHKAdQYKSAqgQWLMQHQpsMKQIMTTMAERDAAIQERNLALSEKKAALAERDVAFLQRDAAIAERNNAIMERDNAIATLQYRE 95 
                     9*****999*****9***655544444432146************************************************************** PP

       GAGA_bind  89 nsla....salpvgvqvlsgtksidslqq.lse.pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177
                     nsl+     ++p+g+q+++g+k+i++ qq +++ p+++d ++ +re+++++alp    ++ea ++      +rak+pke+k+++++kk++k  kk
  XP_027354257.1  96 NSLTsgsmPSCPPGCQISRGVKHIHHPQQqVHHlPNIGDASYSAREMHTTDALPAAPIPTEAGKS------RRAKRPKEPKSTSPNKKTSKAAKK 184
                     **99888889*****************9955669*******************955544444333......467799999999999999999999 PP

       GAGA_bind 178 vkkesader.............................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyP 243
                     vkkes+d +                             ska++k +dl+ln+v++Dest+P+PvCsCtG+lrqCYkWGnGGWqSaCCttt+S+yP
  XP_027354257.1 185 VKKESEDLNkvmfgkahewksgqemvnggddlnkqlavSKADWKGQDLGLNQVAYDESTMPPPVCSCTGVLRQCYKWGNGGWQSACCTTTLSMYP 279
                     999999955599*********************************************************************************** PP

       GAGA_bind 244 LPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     LP+++++r+aR++grKmS++af+klL++LaaeG+dlsnpvDLkdhWAkHGtn+++ti+
  XP_027354257.1 280 LPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK 337
                     *********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MDDAGHRENG RHKADQYKSA QGQWLMQHQP SMKQIMTTMA ERDAAIQERN LALSEKKAAL  60
AERDVAFLQR DAAIAERNNA IMERDNAIAT LQYRENSLTS GSMPSCPPGC QISRGVKHIH  120
HPQQQVHHLP NIGDASYSAR EMHTTDALPA APIPTEAGKS RRAKRPKEPK STSPNKKTSK  180
AAKKVKKESE DLNKVMFGKA HEWKSGQEMV NGGDDLNKQL AVSKADWKGQ DLGLNQVAYD  240
ESTMPPPVCS CTGVLRQCYK WGNGGWQSAC CTTTLSMYPL PAVPNKRHAR VGGRKMSGSA  300
FNKLLSRLAA EGHDLSNPVD LKDHWAKHGT NRYITIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-145BBR-BPC family protein