PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027354022.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 330aa MW: 37717.5 Da PI: 4.2826

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027354022.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.7	1.5e-11	168	211	6	54
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr ++Pk + K++ +iL +++Y+k+L XP_027354022.1 168 LMAERRRRKRLNDRLSMLRAIVPKiS------KMDRTSILGDTIDYMKEL 211 589*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MELYDQDFLE ELMTLRRETW DTNPNTEENP FFSNSWSFDS FDQNSLPYLP NSSCGQEVPQ 60 GYNDYTFNEI YGSLLDESFA PQIIDSHYNT LDTPLNTPPF LAQEDYPLSM MEEDDPGLLG 120 EELQNLELQT TCKMEPTQSP EMPVFNMGTG LERKNRSKKL QGQPSKNLMA ERRRRKRLND 180 RLSMLRAIVP KISKMDRTSI LGDTIDYMKE LLEKINNLQQ EIEVDSNMAG IFRDAKPNEI 240 LVRNSPKFEV ERSLDTRVQI CCAGKPGLLL STVNTLEALG LEIQQCVISC FNDFTMQASC 300 SEELEGRTML SSEDIKQALF RSAGYGGRCL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	171	178	ERRRRKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65640.1	7e-83	bHLH family protein