PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027353981.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

CO-like

Protein Properties

Length: 313aa MW: 34230.3 Da PI: 7.3662

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027353981.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	28.3	3.7e-09	4	47	4	41
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 + C+ +++ ++l+C+ ++ +lC+ C ++ H H +v+ XP_027353981.1 4 KLCDSCKSATATLYCRPDSAFLCAACDSKVHAAnklasrHPRVS 47 68*****************************6567777787776 PP
2	zf-B_box	22.7	2.1e-07	47	90	4	41
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 C+ +e+ +++ C+ + lC C +H+ H++ p XP_027353981.1 47 SLCEVCEQAPAHVTCKADAAALCLACDRDIHSAnplasrHERLP 90 68*****************************6688888898876 PP
3	CCT	70.8	3.5e-24	256	299	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eKrk+RkFeK+irY+sRKa+Ae+RpR+KGrF+k++ XP_027353981.1 256 REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRS 299 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence
MASKLCDSCK SATATLYCRP DSAFLCAACD SKVHAANKLA SRHPRVSLCE VCEQAPAHVT 60 CKADAAALCL ACDRDIHSAN PLASRHERLP VTPFFESVHS VKSSSPINFL DDHRFFSDAD 120 ADVSTEEAEA ASWLLPTPKT DLNSSQYLFS ESEPVPYIDL DYGCVDPKAD QKSSATTDGV 180 VPVQSNFEPF AYGYKYNTTL SQSQSQSQSQ ISHSVSSSSM EVGVVPDGNT MSEISNCSYS 240 KVAAVTVTAQ FSAADREARV LRYREKRKNR KFEKTIRYAS RKAYAETRPR IKGRFAKRSD 300 VDPLAGYGVV PSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24930.1	1e-101	CO-like family protein