PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027353908.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 528aa MW: 59221.8 Da PI: 7.274

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027353908.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.3	4.7e-10	474	522	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 ++W+ E++ l av ++G+g+Wk+I + + Rt+ ++k++w++ XP_027353908.1 474 KKWSVLEEQTLRTAVDKFGKGNWKLILNSHKdifEDRTEVDLKDKWRNM 522 68*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 528 aa Download sequence
MDSEEDGGCW VLEFLLGNPL VESNLIKKVL WKITVPNADS RLKKTILLKT LQHYLSTVSI 60 AESILQTLEI LEELLRLEGS PITAAMSAAY CAVAVECTLK YLQLELNDNP AYHGAVERIW 120 RGRVRWMDPS MNASREGSLL FSAELKRWRN DIEASLLDSR LRERLASSRT RRNAVRKLKV 180 YLAEAMQNLG PSFLEVAASM PANNGRIDAV ESMRAEDDGI DAETRRACSG THELTHPKRV 240 SPVEIQRDNK LFEAKGTSVA AEEAGPSTSR CKNDSVPKGA CVATHVNHEL THQERVSPVE 300 ILKDNKLSEA KDTGTGAEEV SPSTTCSKVD SATNCEVQKA GESHEVEDPI LNSLHMSGNA 360 RAELAKKDMN QEPPIENQSR DADVSFPRTG QRINNNDDNL NEGTSVPQKG DQRPSLMEKN 420 NTACTYEWND AIDGLQGGTS NPESRFHFPS PKRRKLSPLK KYEPANITRR RKPKKWSVLE 480 EQTLRTAVDK FGKGNWKLIL NSHKDIFEDR TEVDLKDKWR NMMRYGCK

Sequence ? help Back to Top

Protein Sequence Length: 528 aa Download sequence

MDSEEDGGCW VLEFLLGNPL VESNLIKKVL WKITVPNADS RLKKTILLKT LQHYLSTVSI  60
AESILQTLEI LEELLRLEGS PITAAMSAAY CAVAVECTLK YLQLELNDNP AYHGAVERIW  120
RGRVRWMDPS MNASREGSLL FSAELKRWRN DIEASLLDSR LRERLASSRT RRNAVRKLKV  180
YLAEAMQNLG PSFLEVAASM PANNGRIDAV ESMRAEDDGI DAETRRACSG THELTHPKRV  240
SPVEIQRDNK LFEAKGTSVA AEEAGPSTSR CKNDSVPKGA CVATHVNHEL THQERVSPVE  300
ILKDNKLSEA KDTGTGAEEV SPSTTCSKVD SATNCEVQKA GESHEVEDPI LNSLHMSGNA  360
RAELAKKDMN QEPPIENQSR DADVSFPRTG QRINNNDDNL NEGTSVPQKG DQRPSLMEKN  420
NTACTYEWND AIDGLQGGTS NPESRFHFPS PKRRKLSPLK KYEPANITRR RKPKKWSVLE  480
EQTLRTAVDK FGKGNWKLIL NSHKDIFEDR TEVDLKDKWR NMMRYGCK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	452	472	KRRKLSPLKKYEPANITRRRK
2	452	475	KRRKLSPLKKYEPANITRRRKPKK
3	453	473	KRRKLSPLKKYEPANITRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	4e-13	MYB_related family protein