PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027353530.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SBP

Protein Properties

Length: 1002aa MW: 110732 Da PI: 6.1594

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027353530.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.7	2.5e-41	148	225	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C +dls+ak+yhrrhkvCe+hska+++lv + +qrfCqqCsrfh+l+efDe+krsCrrrLa+hn+rrrk+++ XP_027353530.1 148 ICQVEDCGTDLSNAKDYHRRHKVCEMHSKASKALVGNAMQRFCQQCSRFHMLQEFDEGKRSCRRRLAGHNKRRRKTNQ 225 5**************************************************************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 1002 aa Download sequence
MEARFGAEAF HLYGSSDLRG VGKRTVEWDL NEWKWDGDLF VARPLSPVPE HRQFFPVPGG 60 SSNSNSSSSC SDDVDLGIRR GNKEGERKRR VVVVEDETGL NEEAGSLSLK IGGGRGVGGS 120 TVATQIASWE GTNGKKSRVA GGTSNRAICQ VEDCGTDLSN AKDYHRRHKV CEMHSKASKA 180 LVGNAMQRFC QQCSRFHMLQ EFDEGKRSCR RRLAGHNKRR RKTNQGAVPS GSSLNDDQTS 240 SYLLISLLKI LSNMHYQNTD QDLLTHLLKS LASQNGEQGS KNLSKLLREP ENLLKEGRSS 300 GKSEVVSTLF SNGSQGSPTT TKQNQSVSIS EIQHQVMHAH DARAADQQTV SSTKPSVSNS 360 PPAYSEARDS TAGQTKMNNF DLNDIYVDSD DGIEDIERLP VSGNLGTTSS LDYPWMQQDS 420 HQSSPPQTSG NSDSASAQSP SSSSGEAQSR TDRIVFKLFG KEPNDFPLVL RAQILDWLSH 480 SPTDIEGYIR PGCIVLTIYL RQAEAVWEEL CYDLASSLNR LLDVSDDDFW RTGWVHIRVQ 540 HQIAFIFNGQ VVIDASLPSR SNYSKILSVS PIAVPASKTA QFSVKGINLI RPATRLLCAI 600 EGSYLVCEDA CESMDQCSKD LDELECIQFS CSVPVMNGRG FIEIEDQGLS SSFFPFIVVE 660 EDVCSEICVL EPLLELSDTD PDIEGDGRIK ARNQAMDFIH EMGWLLHRSQ MKSRMVHLNS 720 GADLFPLNRF KWLMEFSVDH DWCAVVKKLL NLLFDGTVST GDHPSLYLAL SELGVLHRAV 780 RRNSRQLVEL LLRFVPENIS DKLGAEDTVL VDEENQSFLF TPDVIGPAGL TPLHIAAGKD 840 GSEDVLDALT NDPCMVGIEA WKSARDSTGS TPEDYARLRG HYTYIHLVQK KINKKQGGTH 900 VVVEIPSNLT GFSTNQKQNE SSTSFEIGKT DVKYVQKHCK LCDHKLSCRT AVGKSLVYKP 960 AMLSMVAIAA VCVCVALLFK SSPEVLYVFR PFRWESLEFG TS

Sequence ? help Back to Top

Protein Sequence Length: 1002 aa Download sequence

MEARFGAEAF HLYGSSDLRG VGKRTVEWDL NEWKWDGDLF VARPLSPVPE HRQFFPVPGG  60
SSNSNSSSSC SDDVDLGIRR GNKEGERKRR VVVVEDETGL NEEAGSLSLK IGGGRGVGGS  120
TVATQIASWE GTNGKKSRVA GGTSNRAICQ VEDCGTDLSN AKDYHRRHKV CEMHSKASKA  180
LVGNAMQRFC QQCSRFHMLQ EFDEGKRSCR RRLAGHNKRR RKTNQGAVPS GSSLNDDQTS  240
SYLLISLLKI LSNMHYQNTD QDLLTHLLKS LASQNGEQGS KNLSKLLREP ENLLKEGRSS  300
GKSEVVSTLF SNGSQGSPTT TKQNQSVSIS EIQHQVMHAH DARAADQQTV SSTKPSVSNS  360
PPAYSEARDS TAGQTKMNNF DLNDIYVDSD DGIEDIERLP VSGNLGTTSS LDYPWMQQDS  420
HQSSPPQTSG NSDSASAQSP SSSSGEAQSR TDRIVFKLFG KEPNDFPLVL RAQILDWLSH  480
SPTDIEGYIR PGCIVLTIYL RQAEAVWEEL CYDLASSLNR LLDVSDDDFW RTGWVHIRVQ  540
HQIAFIFNGQ VVIDASLPSR SNYSKILSVS PIAVPASKTA QFSVKGINLI RPATRLLCAI  600
EGSYLVCEDA CESMDQCSKD LDELECIQFS CSVPVMNGRG FIEIEDQGLS SSFFPFIVVE  660
EDVCSEICVL EPLLELSDTD PDIEGDGRIK ARNQAMDFIH EMGWLLHRSQ MKSRMVHLNS  720
GADLFPLNRF KWLMEFSVDH DWCAVVKKLL NLLFDGTVST GDHPSLYLAL SELGVLHRAV  780
RRNSRQLVEL LLRFVPENIS DKLGAEDTVL VDEENQSFLF TPDVIGPAGL TPLHIAAGKD  840
GSEDVLDALT NDPCMVGIEA WKSARDSTGS TPEDYARLRG HYTYIHLVQK KINKKQGGTH  900
VVVEIPSNLT GFSTNQKQNE SSTSFEIGKT DVKYVQKHCK LCDHKLSCRT AVGKSLVYKP  960
AMLSMVAIAA VCVCVALLFK SSPEVLYVFR PFRWESLEFG TS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60030.1	0.0	SBP family protein