PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027353455.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 276aa MW: 32126 Da PI: 7.9262

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027353455.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.6	6.1e-18	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd+ll ++v ++G g+W+++a+ g++R++k+c++rw +yl XP_027353455.1 16 KGPWTHEEDKLLNEYVSLHGEGRWSSVAKFTGLNRSGKSCRLRWVNYL 63 79********************************************97 PP
2	Myb_DNA-binding	48.5	2e-15	72	113	4	47
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 T+ E+ +++++++ lG++ W+tIa++++ gRt++++k++w+++ XP_027353455.1 72 LTPVEEGIIIELHAILGNK-WSTIAKYLP-GRTDNEIKNYWRTH 113 6999*************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MVAMMGSLST EKGWRKGPWT HEEDKLLNEY VSLHGEGRWS SVAKFTGLNR SGKSCRLRWV 60 NYLRPGLKKD QLTPVEEGII IELHAILGNK WSTIAKYLPG RTDNEIKNYW RTHFRKRDKP 120 NHKKLDSGKA SKVLKQSKQK QQQEQQPQDQ DIKNITSHEK TKNNETKSSE TQQNEQQGMG 180 VMHPTMEHQY NLPLMYQELS STWQDTIRAD DSIWCSLWDF NEPQGFADYS KQFCECVVPN 240 QPTFADDGGD SMQNQDKISC FDYTYDNLFY GKHMFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30210.1	4e-63	MYB family protein