PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027353402.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SBP

Protein Properties

Length: 772aa MW: 86462.7 Da PI: 6.9135

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027353402.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	119	2.4e-37	105	179	2	76
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 Cqv+gCe+d+se+k yhrrh+vC ++++a++vl++g+ +r+CqqC++fh ls+fDe+krsCrr+L++hn rrr+k XP_027353402.1 105 CQVPGCEVDISELKGYHRRHRVCLHCANASTVLLHGEAKRYCQQCGKFHVLSDFDEGKRSCRRKLERHNTRRRRK 179 ************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 772 aa Download sequence
MEPQSFTPPP HMESEDPSSI WDLSYLLDFN LDDDNSLPLN DLQPPHLQTP ANDKVRKRDP 60 RLTCSNFLAG RVPCACPELD AKLEDDGLPG KKRPRTARAS TSASCQVPGC EVDISELKGY 120 HRRHRVCLHC ANASTVLLHG EAKRYCQQCG KFHVLSDFDE GKRSCRRKLE RHNTRRRRKP 180 PPSDSTAAAD HDLQPVNQNE DCNYDGDAGK GLYCSNLSSE INEKEASPYQ EDELVPIPSS 240 APDTQNINSD SVVSLTASGE TRVNSGKDVS NTSNSPSYCD NKSAYSSMCQ TGRISFKLYD 300 WNPAEFPRRL RHQIFQWLAN MPLELEGYIR PGCTILTIFI AMPNIMWINL LKDSLEYARD 360 LVAPGKMLYG RGTALIHLND MIFRVMKDGT SVTKVEVNMQ APRLHYVHPT YFEAGKPMEF 420 VACGSNLLQP KFRFLVSFSG KYLKCQHCVP SPHNWTEDNI SCAFDSQLYK IYVPHTEESL 480 FGPAFIEVEN ESGLSNFIPV LIGDKEICTE MKTLQQKLDI SLLSRQFQSA SGGSICSSCE 540 DFALRHASSS DLLVDIAWLL KDPTSETFDR LMTASQIHRY CHLLDFLMCN DSSVILGKIL 600 PNLIFLTESM KSNIVINRMG DVDMTPLLKC IHNARDAIYQ NHLKGGDIGV HSEMEAFKLA 660 QGCSKNDMLS VVAVTTQDVL SRADARLGIL KSPTSNEKNE RIPLLKREII MNVEELPVRC 720 GRRNLARGFL TSRPAVFVIV SVAVCLGVCV AVLHHGRVSE LAVSIRRCLF NY

Sequence ? help Back to Top

Protein Sequence Length: 772 aa Download sequence

MEPQSFTPPP HMESEDPSSI WDLSYLLDFN LDDDNSLPLN DLQPPHLQTP ANDKVRKRDP  60
RLTCSNFLAG RVPCACPELD AKLEDDGLPG KKRPRTARAS TSASCQVPGC EVDISELKGY  120
HRRHRVCLHC ANASTVLLHG EAKRYCQQCG KFHVLSDFDE GKRSCRRKLE RHNTRRRRKP  180
PPSDSTAAAD HDLQPVNQNE DCNYDGDAGK GLYCSNLSSE INEKEASPYQ EDELVPIPSS  240
APDTQNINSD SVVSLTASGE TRVNSGKDVS NTSNSPSYCD NKSAYSSMCQ TGRISFKLYD  300
WNPAEFPRRL RHQIFQWLAN MPLELEGYIR PGCTILTIFI AMPNIMWINL LKDSLEYARD  360
LVAPGKMLYG RGTALIHLND MIFRVMKDGT SVTKVEVNMQ APRLHYVHPT YFEAGKPMEF  420
VACGSNLLQP KFRFLVSFSG KYLKCQHCVP SPHNWTEDNI SCAFDSQLYK IYVPHTEESL  480
FGPAFIEVEN ESGLSNFIPV LIGDKEICTE MKTLQQKLDI SLLSRQFQSA SGGSICSSCE  540
DFALRHASSS DLLVDIAWLL KDPTSETFDR LMTASQIHRY CHLLDFLMCN DSSVILGKIL  600
PNLIFLTESM KSNIVINRMG DVDMTPLLKC IHNARDAIYQ NHLKGGDIGV HSEMEAFKLA  660
QGCSKNDMLS VVAVTTQDVL SRADARLGIL KSPTSNEKNE RIPLLKREII MNVEELPVRC  720
GRRNLARGFL TSRPAVFVIV SVAVCLGVCV AVLHHGRVSE LAVSIRRCLF NY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	166	178	RRKLERHNTRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18830.1	0.0	SBP family protein