PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027353383.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 212aa MW: 25104.5 Da PI: 8.1951 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.6 | 1e-18 | 56 | 110 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+ ++t++q+e Le+ F+++ +++ e++ +L+++lgL+ rq+ vWFqNrR+++k XP_027353383.1 56 EKKKRLTSNQIELLERSFQEEIKLDPERKMKLSRELGLQPRQIAVWFQNRRTRWK 110 57788*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 116.4 | 1.7e-37 | 56 | 147 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekk+rl+++q++lLE+sF+ee kL+perK++l+reLglqprq+avWFqnrR R+k+kqlE+ y++Lk+++d +++e+++L++ev +L++ l+ XP_027353383.1 56 EKKKRLTSNQIELLERSFQEEIKLDPERKMKLSRELGLQPRQIAVWFQNRRTRWKAKQLEHLYDVLKHQFDIISKEKQKLQEEVMKLKAILR 147 69*************************************************************************************98776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MDWHESTRPF VPRPESSLSF FYNYNNHPYP EVEMKQATLT ETTQRLVPAM ENGNKEKKKR 60 LTSNQIELLE RSFQEEIKLD PERKMKLSRE LGLQPRQIAV WFQNRRTRWK AKQLEHLYDV 120 LKHQFDIISK EKQKLQEEVM KLKAILREQG FKTQTLMGYT EISGEETVES TSEALRGSTS 180 NKFAEGYCSF TVDDYNTVSL PHCQWPAMPY YP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 57 | 86 | KKKRLTSNQIELLERSFQEEIKLDPERKMK |
2 | 105 | 113 | RRTRWKAKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03790.1 | 3e-51 | HD-ZIP family protein |