PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027353335.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 233aa MW: 26410.2 Da PI: 9.4754 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.1 | 2.3e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ienk+ +qvtfskRr+g+lKKA+E+SvLCda+va+i+fs++gkl+eyss XP_027353335.1 9 KPIENKTSQQVTFSKRRTGLLKKANEISVLCDAQVALIMFSTKGKLFEYSS 59 78***********************************************96 PP | |||||||
2 | K-box | 79.6 | 7.5e-27 | 81 | 162 | 9 | 90 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqee 90 ++++ + +++ e+ kL +++e ++r+ R++lG+dL++L+lkeLq+LeqqL++slk+iR++Kn+++ ++i+el k++ke ++ XP_027353335.1 81 ANNEPQGNWSFEYIKLTAKVEVIERNVRNFLGNDLDPLTLKELQSLEQQLDTSLKRIRTRKNQVMNQSISELHKRMKEKVKT 162 45556789*****************************************************************999986655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MGRGRVQLKP IENKTSQQVT FSKRRTGLLK KANEISVLCD AQVALIMFST KGKLFEYSSE 60 RSMEDILERY ERHTHTELGE ANNEPQGNWS FEYIKLTAKV EVIERNVRNF LGNDLDPLTL 120 KELQSLEQQL DTSLKRIRTR KNQVMNQSIS ELHKRMKEKV KTQTERPHSC PETLGQSAAT 180 LNLSSPELLP SQRLVPSLTL SGTLQGRVSL EETGEAQTAP SGNAIIPPWM LHI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60910.1 | 6e-72 | MIKC_MADS family protein |