PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027353213.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 391aa MW: 42908.2 Da PI: 9.6538

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027353213.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.4	1.4e-17	117	162	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l+++v+q+G+ +W++Ia+ + gR++k+c++rw++ XP_027353213.1 117 RGHWRPAEDEKLKELVAQYGPQNWNLIAENLD-GRSGKSCRLRWFNQ 162 899***************************.*********996 PP
2	Myb_DNA-binding	57	4.3e-18	169	212	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l+ a+k++G++ W+ Iar ++ gRt++ +k++w+ XP_027353213.1 169 RRAFSEEEEERLLAAHKMYGNK-WAMIARLFP-GRTDNAVKNHWHV 212 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MSSLSHHFNN GGEGFSRDIS FFPYSLLLSS QASPLSKTTR FMSDANGVQA PKPEMGLQIL 60 SPPMFQPQES RGTKRPIDEG GGFLGVENKN LSLKLGDEVE AKSSASGKIG YTKLCARGHW 120 RPAEDEKLKE LVAQYGPQNW NLIAENLDGR SGKSCRLRWF NQLDPRINRR AFSEEEEERL 180 LAAHKMYGNK WAMIARLFPG RTDNAVKNHW HVIMARRHRE QSSMYRRRKA SVSETIPKGL 240 KLTLSSNNAA SESTISSTID ESASTCTNLS LTPSSAKLTP IGPFDKPGPL LNHQGLGSLR 300 GQSKESGVAT RDVNYDKFFG AWKSTCKAET VGKLKGVVVD QSNFSDSNSE VSVSESVATN 360 RSNLSISGES ENVGDNKLNM PFIDFLGVGA T

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MSSLSHHFNN GGEGFSRDIS FFPYSLLLSS QASPLSKTTR FMSDANGVQA PKPEMGLQIL  60
SPPMFQPQES RGTKRPIDEG GGFLGVENKN LSLKLGDEVE AKSSASGKIG YTKLCARGHW  120
RPAEDEKLKE LVAQYGPQNW NLIAENLDGR SGKSCRLRWF NQLDPRINRR AFSEEEEERL  180
LAAHKMYGNK WAMIARLFPG RTDNAVKNHW HVIMARRHRE QSSMYRRRKA SVSETIPKGL  240
KLTLSSNNAA SESTISSTID ESASTCTNLS LTPSSAKLTP IGPFDKPGPL LNHQGLGSLR  300
GQSKESGVAT RDVNYDKFFG AWKSTCKAET VGKLKGVVVD QSNFSDSNSE VSVSESVATN  360
RSNLSISGES ENVGDNKLNM PFIDFLGVGA T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	2e-72	MYB family protein