PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027353111.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

AP2

Protein Properties

Length: 703aa MW: 77378.4 Da PI: 6.7453

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027353111.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	46.6	8.6e-15	271	330	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_027353111.1 271 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqtRKgRQVYLGGYDKEEKAARAYDLAALKYWG 330 57*****************666664478446***********************98 PP
2	AP2	46.3	1.1e-14	373	424	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_027353111.1 373 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDVAAIKFRG 424 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 703 aa Download sequence
MGSMNLLGFS LSPQEHPPNQ DHSQTAPSRF GFNPDGISST DVAGECFDLT SDSTTHSLNL 60 PPFGIYEAFH RNNNIHTTQD WKENYNSQNL LLGTSCSNQN MNQNQHQHQQ QQPKLENFLG 120 GHSFGDNHEH QAYGGNSAST DYMFPNCSLQ LPSQSVVAGG GGGSASNGNS IGLSMIKTWL 180 RNQPPHSESN NNNNNESGGI TSRTSVQTLS LSMSTGSQSS SSLPLLTASV DGESSSNNKQ 240 PLTTVALDTT QTGPIDTAPR KSIDTFGQRT SIYRGVTRHR WTGRYEAHLW DNSCRREGQT 300 RKGRQVYLGG YDKEEKAARA YDLAALKYWG TTTTTNFPIS HYEKELEEMK HMTRQEYVAS 360 LRRKSSGFSR GASIYRGVTR HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE AAEAYDVAAI 420 KFRGLSAVTN FDMSRYDVKS ILESTTLPIG GAAKRLKDME QVELNVDGHR TDQEDHMIMN 480 SHLTEGINNF GGGSTHHNWH NALAFHQHQP CTTIHYPYGQ RLWCKQEQQD NSDSSHTLSY 540 PDIHQLQLGN NGTHNFFNTN SGLHTIMNID SSSMDNSSGS NSVVYDGYGG SGGYVIPMGT 600 TTVAASDGNQ NERSNNGFGD NEIKVLGYEG VYGSTDPYHA HARNMYYLSQ HQSSSVDAVK 660 TSAYDQGSTC NSTWVPTAIP TLAPRSTNMA LCHGAPPFTL LHE

Sequence ? help Back to Top

Protein Sequence Length: 703 aa Download sequence

MGSMNLLGFS LSPQEHPPNQ DHSQTAPSRF GFNPDGISST DVAGECFDLT SDSTTHSLNL  60
PPFGIYEAFH RNNNIHTTQD WKENYNSQNL LLGTSCSNQN MNQNQHQHQQ QQPKLENFLG  120
GHSFGDNHEH QAYGGNSAST DYMFPNCSLQ LPSQSVVAGG GGGSASNGNS IGLSMIKTWL  180
RNQPPHSESN NNNNNESGGI TSRTSVQTLS LSMSTGSQSS SSLPLLTASV DGESSSNNKQ  240
PLTTVALDTT QTGPIDTAPR KSIDTFGQRT SIYRGVTRHR WTGRYEAHLW DNSCRREGQT  300
RKGRQVYLGG YDKEEKAARA YDLAALKYWG TTTTTNFPIS HYEKELEEMK HMTRQEYVAS  360
LRRKSSGFSR GASIYRGVTR HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE AAEAYDVAAI  420
KFRGLSAVTN FDMSRYDVKS ILESTTLPIG GAAKRLKDME QVELNVDGHR TDQEDHMIMN  480
SHLTEGINNF GGGSTHHNWH NALAFHQHQP CTTIHYPYGQ RLWCKQEQQD NSDSSHTLSY  540
PDIHQLQLGN NGTHNFFNTN SGLHTIMNID SSSMDNSSGS NSVVYDGYGG SGGYVIPMGT  600
TTVAASDGNQ NERSNNGFGD NEIKVLGYEG VYGSTDPYHA HARNMYYLSQ HQSSSVDAVK  660
TSAYDQGSTC NSTWVPTAIP TLAPRSTNMA LCHGAPPFTL LHE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17430.1	1e-144	AP2 family protein